Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1528 ATGCAGCTCCTAACTCATGAGGTCTTGGGGAAGGAAAAGGTTTTAATTTTCAGGGGTCTGATAATAATGGATTGCTTTCCATGTTGCAATAAGTCTGATATTGAAACGGTGCCGTTGAGCACAAGCCCCTCAGAATATGCAAAAGCCAGAAGATCCACCTTCAAATCATTTGTAGGTGCTCTCTCTTCTAAAACAGGAAGCAGCAGGCAAAGGCACATAACAGCAGAGATACGAAAATATGGAACAGCGAAGAACAGTGCGAAAGTATTCACATATCAAGAACTGGCCCCAGCAACAGATGACTTCAGTCCTGCTTGCTTGATCGGTGAAGGTGGCTTTGGGAATGTCTACAAAGGATACCTACAAAGCCTTAATCTAGCAGTGGCAGTGAAGAGGCTGGACAGGAATAAATTGCAGGGAAGCAGAGAATTCTTCTCAGAGGTAGTGATGTTGAGTTTGGTGAAGCATCCAAACCTTGTGAAGCTTATTGGTTATTGTGTTGAAGGAGATCAAAGGATTTTAGTTTATGAATTGATGGCCAATGGCAGTTTGGAAAGTCACCTTCTAGATTTAGCCCCAGACAAGGAGGCACTAGATTGGTATACCAGGATGAAAATTGCAGAAGGAGCTGCAAGAGGGCTTGAATACCTTCATGAAGAAGCTGATCCACCAATCATATTTCGTGACTTGAAGGCATCAAACATACTATTAGATGCAAACTTTAATGCAAAGCTCTCAGATTTTGGACTAGCCAAGCTGGGTCCAACAGAAGAAGGCAAGGACCATGTCTCCACCAGGGTGATGGGCACCTATGGCTACTGTTCTCCAGAGTATGCTTTAACAGGACACGTTACTATAAAGTCAGATGTTTATAGTTTCGGAGTTGTCTTGTTGGAAATTATCACCGGTAAAAGAGTGTATGACACTGCTAGAGAAGAGTCAGAGCAGAATCTTATTGACTGGGCACAACCTCTGCTTGAGGACAGAGAAAAGTTCCATCTAATGGCAGACCCTTTGCTCAAGGATAACTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGACCTTTGATGAGTGACGTAGTGGAAGCTCTTCAGCATCTAACAGAGCCAACACATGAAGAAGAATACAACAAAGGCGAATCCATAAAATATGCAGGCCATGTTGAATCTTTTAGGGTTACAAGTGCACGTGTAGACCAACAATAA 1245 0.4337 MQLLTHEVLGKEKVLIFRGLIIMDCFPCCNKSDIETVPLSTSPSEYAKARRSTFKSFVGALSSKTGSSRQRHITAEIRKYGTAKNSAKVFTYQELAPATDDFSPACLIGEGGFGNVYKGYLQSLNLAVAVKRLDRNKLQGSREFFSEVVMLSLVKHPNLVKLIGYCVEGDQRILVYELMANGSLESHLLDLAPDKEALDWYTRMKIAEGAARGLEYLHEEADPPIIFRDLKASNILLDANFNAKLSDFGLAKLGPTEEGKDHVSTRVMGTYGYCSPEYALTGHVTIKSDVYSFGVVLLEIITGKRVYDTAREESEQNLIDWAQPLLEDREKFHLMADPLLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVEALQHLTEPTHEEEYNKGESIKYAGHVESFRVTSARVDQQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1528 414 SUPERFAMILY Protein kinase-like (PK-like) 84 378 IPR011009 -
Dere10g1528 414 Pfam Protein kinase domain 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1528 414 Gene3D Phosphorylase Kinase; domain 1 62 178 - -
Dere10g1528 414 ProSiteProfiles Protein kinase domain profile. 102 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1528 414 FunFam Serine/threonine-protein kinase CDL1-like 73 178 - -
Dere10g1528 414 SMART serkin_6 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1528 414 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Dere10g1528 414 PANTHER OS07G0668900 PROTEIN 25 388 - -
Dere10g1528 414 CDD STKc_IRAK 108 380 - -
Dere10g1528 414 Gene3D Transferase(Phosphotransferase) domain 1 179 403 - -
Dere10g1528 414 FunFam Serine/threonine-protein kinase PBS1 179 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1528 Dere-ChrDere10 27347793 27355094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1528 23 380 Glycoside Hydrolase AT3G07070 57.263 4.05e-141 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere10g1528 Pkinase 3.7e-45 CL0016