Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1523 ATGGATCCTGGCGTGGACAAAGAGGCAATTGTGGTGGTAGAAACAGAGGACGTAGCTCTCGGAACAACAATCGACCCACTTGTCAGGGACATCTCCAATTTCAAAACTCCCAAACGCCCCTCTCACAACCTCAACTTCCAATCTCCATGCCAGAAATTCTTCACCGCTTCCAAGCAAACGCCGCGCTCCTCGGCATTTCGTCACCGGCCGTGTATAGCTCCGCCGTCTTCAGCTCGGACCAAGAAGTCATCGGCAGTAGCGGCCAGGAAACTCAAGGCGTTCGAACTTGAGCAGTCTCAGTCGTCGAGAAAAGCTCAAATCAAGAAAGAGCAGTCTCTCAAATCCCTAGCCAAGTCCATCACCGTTTGGCTTAATTTTTTGTTCGACAACCCCGCTACGTGCGGATGTGACTTGTCCGTCGCTGGAATCCAGATCGGGGATAAGGACTATGAAACGGAGGTGACGAAAGGGAAAAGGGATAGCGGTCCTGGGATTTCCATTGGAGTTGATAAAGCCTGGCGTACTCCGAAGCGGCAGAGGAAGACGTGGTCGCGGGGTGAGGAGCACAATGGGAAGGAAAATGCATTGGTGGAGTTGTCAAATTCTATGTTTTCGTACTTGAGGGACTCTCTGAAGGATGTCTGCAGTTTCGATGATTTGAAGCAGCGAATGAGTGTTTATATGAACTTGGGAAGTTGTGAAGAGATTTTTGAAGTTATGAATCAAGTCACAAAGAATATTGATGAGGGAAGGTTGAAGTTGAAGCCACATTGCCCGATAGTAACAGATGTTGGATTGAAAAATATGGCCATAAGAATTCTTATGTGTTATAATCCAATTTGGCTACGAATTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGTCAAATGGAGACGTCGATTCTGAACAAGAAATCACATTTTTGAAAATGGTCATTGAGAAGCAATTTTTTTCACATGCGGGTTTAGCAAAAGCCTATGCTTACAACAAGATGGTTGATGGCCTGTACAGGCCAGGATACTACGAGAATTTGGGGAATGTTATTTTAAAGAGAATTTTGTTGCTTGTGCTTATCCTAGATAGAGTTAAATCTCAGAGTTGCCTTTCAATTAAGTACGGTATCGATGGATTGGATGGTGGTTCCCCTTTACTCTTCAAAGCAGAATCTTGGATCAAATCAAGTGGTCAAGTGATCATCGGTAAATCTTTGTATATGCTTCAGTCCTGCTATGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTGATTATAGGGTACAAAGTGTCTCATCAACAGGGGCCTCTTGTGGAGTATGACTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAGCTGTGTAGAGCTATTCAGCTCTTGCAACATAATTCTGCTATCCTCACGAAAATTGTAATTCCCTCAGATACTTATAAGAAGAATTTGGCAAACTGTGGTCTAGCCCTGCAATACCTTAGGCAAGCTGGTGTGTTGCTACATGATGAGGATGGCATGATGATAGTGGCAGACGATGTTGCCAATGGAGATAAAGAACTTATTCTCTCGTTGCTCTGGAATATCTTTGTCCACCTGCAGCTGCCTCTTTTAATTGATAAATCAAGTTTAGTCGAGGAAATTGCTAAAATTCGCGGAATTGGAATGGATGCCATTAATGGTGAAAATTCAAGTTCATTGGAATTGCTTTTGAGTTGGATTAAGGCAGTCTGTGAACGTTACGGTTGTGTGATTGACAATTTTCATTCACTAGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAAAAAGAACTTCATAGTTCTTGTTCATTGAAGGAAGTTAATACAAAAAAAGGCAAGGAATCAATAATGTCCATCAGTGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAAGTTGACTACATTATTAGGAAATTTTCCTGAGGTACTTCAAATAAGTGACCTACTTGAGTATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATATTGCTGGTTTTCCTTGCAAGGCAATTATTCGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTAGGTTGTGATTGCCGAAGTCTATACCGGAAACATCTCAGGATGGGGCAGTGCCTTTCAAGTTTTCAAGCAGTAGAAAAGCCAGACACTTTTGATGTGCATGACACTGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGACATGGCTGAAAGAAATCTTAAATCTTATACGAAACTGACTTCATGCAGACCCTTTTCAAGTGGCACCAGCACCGGCATCAACGTTAGAAGAGAAACTGCTGCAATAACTATACAATCACATTTCAGACGATTGGTTGCTCGTCGTATGTTTCTCAAGATGATGAATGCTGTCTCTCTTCTGCAAACTGTTTTACGAGCTTGGCTAAATGTGAGGCAGGAGTCATCGTTCACTTTTGTTCCTGCCCAATATTTTTCATGTGTCATTTGCAGAGCAACACGAATGCAATCAGAAACATATAGGAGATATGCCATGTTTTTCGTTCATAGGCACTCTTTTTTGAAGTTGAAGAGGTCCGCATTACTTATCCAGCAAGCAGTGAGGAATTGGCTCTCCTGGAGGCATCAGCAGGGGTGCAGTATAATTCCTGATCTTACGGCTCCAGATCCAGTGGCTGCTGCCACTATTGTTCAGAAATTTGTTCGTGGTTGGATGGCACGTTACAGATATATTTGTATGCTTGATGAGAAAGAGAAAGCTTCAAATTTGTATCAATATAAGGTTACTTTTGATCTACAAACAAAAGCAGCCATCAAGATTCAGCTTGCTTGGAAGACGTACATATGCGGCAAATGTGTAAAGACTTTTCAACACTACAAAATTGCATTCAAGGCAGCAATTGTCATTCAGTCTTTTGTACGTGCATGGGTTGCACGGAAGGAAGTTGATACACGCAGGAATCACATCGTTGCAATTCAAAGATATTATCGTGCTTGGATGGTGAGAAGGGACTTCTTGTTCCAAAGAGGCGCTGCTATGAAGATCCAAAGTGTCATTCTTAGACTGAAGTACCAGAAGGCTTTCAATAGTCGGAAAGATGCTGTGTTGGAGATCCAGCGTTTTATTAGGGGGCATTTAACACGAAATAGGCTATTAGGTAGCGCTTCTAGGCAACGTGCAGTGATTCCCAGTGGTGGCATTTTAAGATCCGTTGGTTATTCTAGTTTTCAACTGGAACAATTCTTATGTTCTGTTCTGAAATTGCAGCGATGGTGGAAGGGTGTTTTGTTAGTGAAATTAAGAACAAAGTCTGTCATTATAATCCAGTCTAGTGCTCGTGGGTGGATTGCTAGGCGAATGGCAACTGTTCGCAGACAACATATTGTTGTCATTCAATCCCACTGGAAAGGTTACCTTGCCCGGAAAGAGTCAAAAGAGCAGCTGCTAGACTTGCGCCTGAGAGTGCAGAAGTCTGCCAAAAATGTGGATGACAGCAAGCGTCTTATAAACAAACTCCTCGTTGCCCTTTCAGAGCTACTTAATATGAGGAGTATCAGTGGCATCCTTCGTACTTGTGCAACGTTGGATATGGCTACAGAACATTCTCAGAGATGTTGTGAAGAACTTGTGGCCGCAGGGGCTATTGACACGTTGCTGAGGCTTATTCGCTCAGTCAGCCGAAGCATACCAGATCAAGAGGTTCTTAAGCATGCTCTGTCAACTCTCCGAAATCTTGCTCGCTACCCTAACCTACTAGAATCGTTGATCCTAAGTAACGGTTCTATACAAACTATTCTCTGGGAACTACTGAGGAATAAGGAGGACAATTACTTTATTGCCTCTGAACTTCTGATGAAGATATCTTCAACTCCTAAGGGCGTTGAATCGTTACGCAAGTTACCTGCACTTGTAAAACGGCTGCATAATCTTGTTGAAGAGCTAACAAGGAAGGGAATCTATGAGAAAAGAAATGGCAGAGGTCCTAATCCAGTTATAAGAGACAATCGAGAGAGGAGACTGAAAGAGGCTGCTGAGATTCTGAAACTGATAACAAGTGCCTGA 4098 0.4231 MDPGVDKEAIVVVETEDVALGTTIDPLVRDISNFKTPKRPSHNLNFQSPCQKFFTASKQTPRSSAFRHRPCIAPPSSARTKKSSAVAARKLKAFELEQSQSSRKAQIKKEQSLKSLAKSITVWLNFLFDNPATCGCDLSVAGIQIGDKDYETEVTKGKRDSGPGISIGVDKAWRTPKRQRKTWSRGEEHNGKENALVELSNSMFSYLRDSLKDVCSFDDLKQRMSVYMNLGSCEEIFEVMNQVTKNIDEGRLKLKPHCPIVTDVGLKNMAIRILMCYNPIWLRIGLYIIFGGDSLVSNGDVDSEQEITFLKMVIEKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLILDRVKSQSCLSIKYGIDGLDGGSPLLFKAESWIKSSGQVIIGKSLYMLQSCYVMHGEGNLLAHLVIIGYKVSHQQGPLVEYDFKVRDLFVDLQDGLKLCRAIQLLQHNSAILTKIVIPSDTYKKNLANCGLALQYLRQAGVLLHDEDGMMIVADDVANGDKELILSLLWNIFVHLQLPLLIDKSSLVEEIAKIRGIGMDAINGENSSSLELLLSWIKAVCERYGCVIDNFHSLVDGKAIWCLLDYYFQKELHSSCSLKEVNTKKGKESIMSISDYSDAVYNFILSQKLTTLLGNFPEVLQISDLLEYNGACSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCRSLYRKHLRMGQCLSSFQAVEKPDTFDVHDTEDAARKFKAIQAWWQDMAERNLKSYTKLTSCRPFSSGTSTGINVRRETAAITIQSHFRRLVARRMFLKMMNAVSLLQTVLRAWLNVRQESSFTFVPAQYFSCVICRATRMQSETYRRYAMFFVHRHSFLKLKRSALLIQQAVRNWLSWRHQQGCSIIPDLTAPDPVAAATIVQKFVRGWMARYRYICMLDEKEKASNLYQYKVTFDLQTKAAIKIQLAWKTYICGKCVKTFQHYKIAFKAAIVIQSFVRAWVARKEVDTRRNHIVAIQRYYRAWMVRRDFLFQRGAAMKIQSVILRLKYQKAFNSRKDAVLEIQRFIRGHLTRNRLLGSASRQRAVIPSGGILRSVGYSSFQLEQFLCSVLKLQRWWKGVLLVKLRTKSVIIIQSSARGWIARRMATVRRQHIVVIQSHWKGYLARKESKEQLLDLRLRVQKSAKNVDDSKRLINKLLVALSELLNMRSISGILRTCATLDMATEHSQRCCEELVAAGAIDTLLRLIRSVSRSIPDQEVLKHALSTLRNLARYPNLLESLILSNGSIQTILWELLRNKEDNYFIASELLMKISSTPKGVESLRKLPALVKRLHNLVEELTRKGIYEKRNGRGPNPVIRDNRERRLKEAAEILKLITSA 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 904 931 IPR000048 GO:0005515
Dere10g1523 1365 Pfam Armadillo/beta-catenin-like repeat 1215 1259 IPR000225 GO:0005515
Dere10g1523 1365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 969 1063 IPR027417 -
Dere10g1523 1365 Gene3D - 430 536 IPR036872 -
Dere10g1523 1365 Gene3D - 1163 1362 IPR011989 -
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 976 1003 IPR000048 GO:0005515
Dere10g1523 1365 SMART arm_5 1214 1259 IPR000225 GO:0005515
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 997 1026 IPR000048 GO:0005515
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 1136 1164 IPR000048 GO:0005515
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 1113 1140 IPR000048 GO:0005515
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 783 811 IPR000048 GO:0005515
Dere10g1523 1365 Gene3D - 1021 1073 - -
Dere10g1523 1365 Gene3D - 903 974 - -
Dere10g1523 1365 Gene3D - 975 1020 - -
Dere10g1523 1365 Gene3D - 1111 1160 - -
Dere10g1523 1365 Gene3D - 782 829 - -
Dere10g1523 1365 ProSiteProfiles IQ motif profile. 1043 1072 IPR000048 GO:0005515
Dere10g1523 1365 CDD CH_ASPM_rpt1 420 531 - -
Dere10g1523 1365 SUPERFAMILY Calponin-homology domain, CH-domain 332 615 IPR036872 -
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 904 922 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 1001 1017 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 976 993 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 1045 1063 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 1139 1155 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 786 801 IPR000048 GO:0005515
Dere10g1523 1365 Pfam IQ calmodulin-binding motif 1114 1131 IPR000048 GO:0005515
Dere10g1523 1365 SUPERFAMILY ARM repeat 1182 1325 IPR016024 -
Dere10g1523 1365 PANTHER UNCHARACTERIZED 48 889 - -
Dere10g1523 1365 SMART iq_5 944 966 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 782 804 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 1042 1064 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 901 923 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 1135 1157 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 867 889 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 1112 1134 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 973 995 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 996 1018 IPR000048 GO:0005515
Dere10g1523 1365 SMART iq_5 1019 1041 IPR000048 GO:0005515
Dere10g1523 1365 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1225 1272 IPR000225 GO:0005515
Dere10g1523 1365 Gene3D - 563 689 IPR036872 -
Dere10g1523 1365 Pfam Calponin homology (CH) domain 444 535 IPR001715 GO:0005515
Dere10g1523 1365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1092 1159 IPR027417 -
Dere10g1523 1365 ProSiteProfiles Calponin homology (CH) domain profile. 414 536 IPR001715 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1523 993 1164 Myosins gene family AT2G20290 25.543 2.77e-08 57.0