Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1505 ATGGTTAATCACAGTCAGCCTGGATGTGCTGTTCGTGCCCTCACCGATCAAAACGCACATCTTAACTGCTTTTCTGATGTCTCAGAGATGAGAATAGAGAAGGAGGAGGAGGAGGGTATGAAGCTGGAATTCTCTGAAGATGAGGAGGCACTCGTTGTTAGGATGTTTTGCTTGGTTGGAGAGAGGTGGTCTCTAATAGCTGGGAGAATCCCAGGAAGGAGTGCAAAAGAGATTGAGAAGTACTGGACTTCAAAGTGCACTTCATCATCAAAGATGAGAACTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTATGAAGCTGGAATTCTCTGAAGATGAGGAGGCACTCATTGCTAGGATGTTTAGCTTGGTTGGAGAGAGGTGGTCTCTAATAGCAGGGAGAATCCCAGGAAGGAGTGCAAAAGAGATTGAGAAGTACTGGACTTCAAAGTGCACTTCGTCGAGTGAGAGATAA 477 0.4717 MVNHSQPGCAVRALTDQNAHLNCFSDVSEMRIEKEEEEGMKLEFSEDEEALVVRMFCLVGERWSLIAGRIPGRSAKEIEKYWTSKCTSSSKMRTEEEEEEEEEEGMKLEFSEDEEALIARMFSLVGERWSLIAGRIPGRSAKEIEKYWTSKCTSSSER 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1505 158 ProSiteProfiles Myb-like domain profile. 102 152 IPR001005 -
Dere10g1505 158 FunFam MYB-like transcription factor 109 151 - -
Dere10g1505 158 MobiDBLite consensus disorder prediction 86 107 - -
Dere10g1505 158 FunFam MYB-like transcription factor 43 85 - -
Dere10g1505 158 Gene3D - 109 152 - -
Dere10g1505 158 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 43 95 - -
Dere10g1505 158 CDD SANT 109 148 IPR001005 -
Dere10g1505 158 SUPERFAMILY Homeodomain-like 42 148 IPR009057 -
Dere10g1505 158 Pfam Myb-like DNA-binding domain 43 82 IPR001005 -
Dere10g1505 158 Pfam Myb-like DNA-binding domain 109 148 IPR001005 -
Dere10g1505 158 SMART sant 40 88 IPR001005 -
Dere10g1505 158 SMART sant 106 154 IPR001005 -
Dere10g1505 158 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Dere10g1505 158 CDD SANT 43 82 IPR001005 -
Dere10g1505 158 Gene3D - 43 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1505 Dere-ChrDere10 27113537 27125514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1505 3 84 MYB Transcription Factor Family AT4G09460 34.146 1.87e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere10g1505 Myb_DNA-binding 1.4e-08 CL0123