Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1490 ATGGAGAGGGATCATGCTGAGAATTCTCTTTTCTCTTCTTGTTCTTCTTCTCCTCTTAGCAGTGTTGTTAACAACCATGGTCATTCAGAATCAGAACCATATCAGATGAGAGTTACTCACCGGCGTTCGAGTGCTCTCATGCCGGAGATGACCCTGAAATCCCCGGCGGTTAGGCCATATGCTCGATCCAAAATTCCTCGCCTTCGCTGGACTCCTGATCTTCATCACCGTTTTGTGCAGGCAATTAAAAGGCTTGGTGGTGAACACAGGGCTACACCAAAGTTGATTTTACAGCTGATGAATGTGAATGGGCTCACTCTCTCTCATGTCAAGAGCCACCTTCAGATGTACAGGAGCCTGAAGCATGAAATTGAAGAAGCAGAGAAGGAGGAGGGGGCATCAGAATTGTTACATTCCTCAGCAGTGTCGTCAAGCTGTTGCGAACAGAATCTTCAGCAAGAAAACGAAGAATCCATCAACAGTAGAATTCTCGAAGAAATTCGCAGCACTTATTGTATGGAAGAGCATGCTGGCAATATCCAAGCACAATGGAATCAAGGAAGTGTGGCGCTAACTTCGAAGGGGAAGAAGGAACAGCAGACCCACACCTATCTCATCTTCAAGGATCTCTTCAAGAGCCATGGTGCCCAAGGGATGAATGACGATGCAAAGGTGTCACTAGGGGCTTCTGGTTATAAAAGCGATCGTGAAAGATTGGAAGGTACAAGTAAGATAGGAGAAAGAGTGGGTGAAGATAAACTGCTTTTGCTTGCTTTTCTTGTTCTTCCTGCAATTGCTAGTGCCAGAAAGCTTGGGAATCAAAAGGATTCTTATGGATTTGGCCAACACAAGACGTTCTTCCACCACTTCTCTGGCTATGTCGGCGGCGGCGGAGGATTCGGTTTTTGGGGTGGTGGTGGAGGCGGATTCGGGGCGGGAAGTGGAGGATATGGTGGTGGATGGGGTGGAGGTTTTGGAAGTGGTGGCGGGGGTGGATACGTTGGTGGGTTTAATAAGTGA 1020 0.4765 MERDHAENSLFSSCSSSPLSSVVNNHGHSESEPYQMRVTHRRSSALMPEMTLKSPAVRPYARSKIPRLRWTPDLHHRFVQAIKRLGGEHRATPKLILQLMNVNGLTLSHVKSHLQMYRSLKHEIEEAEKEEGASELLHSSAVSSSCCEQNLQQENEESINSRILEEIRSTYCMEEHAGNIQAQWNQGSVALTSKGKKEQQTHTYLIFKDLFKSHGAQGMNDDAKVSLGASGYKSDRERLEGTSKIGERVGEDKLLLLAFLVLPAIASARKLGNQKDSYGFGQHKTFFHHFSGYVGGGGGFGFWGGGGGGFGAGSGGYGGGWGGGFGSGGGGGYVGGFNK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1490 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 40 193 IPR046955 GO:0003700
Dere10g1490 339 MobiDBLite consensus disorder prediction 8 32 - -
Dere10g1490 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 122 IPR017930 -
Dere10g1490 339 FunFam Myb family transcription factor 64 122 - -
Dere10g1490 339 Coils Coil 110 130 - -
Dere10g1490 339 MobiDBLite consensus disorder prediction 1 34 - -
Dere10g1490 339 NCBIfam myb-like DNA-binding domain, SHAQKYF class 66 119 IPR006447 GO:0003677
Dere10g1490 339 Gene3D - 65 122 - -
Dere10g1490 339 Pfam Myb-like DNA-binding domain 68 118 IPR001005 -
Dere10g1490 339 SUPERFAMILY Homeodomain-like 65 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1490 Dere-ChrDere10 26949653 26953695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1490 57 123 G2-like Transcription Factor Family AT2G42660 68.657 4.76e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere10g1490 Myb_DNA-binding 2.8e-08 CL0123