Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1482 ATGGAGTGGACTAGGGGCCACACCCTTGGCCATGGTTCCACTGCCACCGTGTCGCTTGCCGAGGCTCATGGGTCCGGTAGGATGTTTGCCGTCAAGTCGGTGGAGCTTCACCGATCAGAATTTCTCAAGAGAGAACAGAGGATTCTGTCCACATTGAAGTGTCCTCACATTGTGGCGTACCATGGTTGTGACATCACGTTTGAGAATGGTGCGTTCTTGTATAACTTGTTCATGGAGTATGCGCCCTATGGGTCGATCGCCGACGAAGTTCGCAAGCGAAATGGTGGCGGGTTGGATGAAGTTGTGGTCAGAGCTTATGCTCATCAGATTCTGCTTGGGTTGAAGTATTTGCATTCCAATGGGATTGTGCATTGTGATTTGAAGGGTCGAAATGTTTTGCTCACCGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGTGTTGCGCCGGAGGATTCTGGTGAGGTGATTGCTGGCACGCCGGCGTTCATGGCGCCTGAGGTGGCCCGTGGGGAACAACAGGGGTTCCCCGCCGACGTGTGGGCTCTTGGGTGTACTGTGCTGGAGATGATCACCGGCAGAGCTCCGTGGCACGGCGTTTCTGACCCGGTAAGTGTGCTCTATCGGGTCGGGTTCTCCGGCGAGGGGCCGGAGATTCCAAGTTTCTTGTCGGAGCAAGGCAGGGATTTTGTGTCCAAGTGTTTGAGAAAAGACCCGAGTGAGAGGTGGTCAGTGGGTGAGCTTCTCAAACATGGTTTCGTTCAGGAATCAATCTGTGTCTCGAAGAAATCTGATGATTCTAGTTTAAATTCTCCAACTAGTGTGTTGGATCGAAGCTTTTGGGACACATTAGAAGAACTGCTGACAACCCAGAATCAGGATATGAATCCAAACCCAACCCGTGATTGTTCTTGGGATTCTCCTAGTCCTAGAAGCAGAATTCGTAGGTTGTCTTCCTCTATACCCAGTTGGGAATGGGATGACAAGTGGATCACAGTTAGAGACTACGGCATCACAGAGTCAGAGAGATTCTTCGATGGCCAGGAATCCGAGGTTGCAGAATCTAATGAAGAAACAGAGAATTGTAGATTAGACAGTGCAAATTACATTAGAGAGGACAATTGTTTCGAAGTTAGTTATGAACCCAGAATAGTTACCACAGTTGGATTGAGCAATTGTTGTAGTGTTAATGATGTGTTTTGGGGTAGCGAATCATTATTAGGATTTTCACTACGCATAAAGATTGTTCCCAATAGAAATTTTTTGCACGATTTGCTTTCTTCTTTCCCTCTCTAA 1302 0.4839 MEWTRGHTLGHGSTATVSLAEAHGSGRMFAVKSVELHRSEFLKREQRILSTLKCPHIVAYHGCDITFENGAFLYNLFMEYAPYGSIADEVRKRNGGGLDEVVVRAYAHQILLGLKYLHSNGIVHCDLKGRNVLLTDEGAKIADLGCARSVAPEDSGEVIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGRAPWHGVSDPVSVLYRVGFSGEGPEIPSFLSEQGRDFVSKCLRKDPSERWSVGELLKHGFVQESICVSKKSDDSSLNSPTSVLDRSFWDTLEELLTTQNQDMNPNPTRDCSWDSPSPRSRIRRLSSSIPSWEWDDKWITVRDYGITESERFFDGQESEVAESNEETENCRLDSANYIREDNCFEVSYEPRIVTTVGLSNCCSVNDVFWGSESLLGFSLRIKIVPNRNFLHDLLSSFPL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1482 433 FunFam Mitogen-activated protein kinase kinase kinase 17 2 310 - -
Dere10g1482 433 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1482 433 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1482 433 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Dere10g1482 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Dere10g1482 433 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Dere10g1482 433 CDD STKc_MAPKKK 2 256 - -
Dere10g1482 433 SUPERFAMILY Protein kinase-like (PK-like) 3 308 IPR011009 -
Dere10g1482 433 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 343 - -
Dere10g1482 433 MobiDBLite consensus disorder prediction 292 311 - -
Dere10g1482 433 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1482 Dere-ChrDere10 26885682 26886983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1482 1 288 MAP Kinase Kinase Kinase AT1G05100 56.333 1.51e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere10g1482 Pkinase 2.5e-53 CL0016