Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1480 ATGACTTCGTTTCCGTCACGTGGAACGCGCCGCACTATTCGGGGCGGTGCCCTTCCTTTCTTCCCCCCTTTTATGAACCAGTCAAACTCTTTTCTTCACGAAACCTCTCCCTTCCCCACAGAACGGGTCGGGTCGGAAACCCGTCTCGTAAATGATTCTACCTTATTGCACTTGAAGAAGACTTCTCAGACTTCATCACCTCCTACCCCTTCTCTCTCTTTGGCTCCGTCACTCCTTCTTCTTCTTCCTCCTCCTTCTCCACGATTCTCTTCCTTTTCATCTCTCTTTCTCACTATTTTTATGGACAAAGGATGGGGTCTCGCCCTTGATTCTTCTTCTTTCTCCAACCGCCACACCATGCTTCCCAGCTCCTTAGGCTTCCCCGTCAGTCTCACCCGCTCCTCCACCGACTCCGACCACCAGCGGGTTGTCCTCGGCGAACTCGACTTCTTCTCCGATCGGAACAAGCATGCTCCTGCAGCTTCCGATCATCACCCCGATGTTAAAACCAATATCTCTATCCCCGTCAAAAAGGAGAATCCTCATGCCGAACCTCCTCGGTTGGATGTCAATACTGGTTTACAGCTCCTTACTGCCAATACTCGGAGCGATCAATCTACGGTCGATGATGGGGTTTCATCAGATGCTGAAGATAAGCGAGCCAAGACCACTACTGAGCTGGCACAATTGCAAGAAGAGCTTCAACGGATGAACGAAGAAAACCAGAGGCTGAAGGACATGCTGAGCCATGTGAGCAATAATTACACAGCCTTGCAGATGCATCTGGCGGCATTAACGCAACAGCAGCAGCAACAACAGCAAATTCAACGTACCCAGAGCACAGAACATGAGGTTGTTCAAGCAAAAGCCGACGATAAAAGAGAAATTGTACCAATGCCATTGCTGGAGTTGGGACCGAGTAGAACAGCTGAAGTAGATAACGAAGTATCCAATTCTTCTTCGGATGAAAGAACACGATCTACCAGTCCTCCTCATAACAACAACAATGGTAAAAGTGAGATCACTGCAAGGGAAGAGAGTCCAGACTCAGATATTCAGCCACAAGGCTGGGGTAATGGTCCTAACAAGCTCCAGAAACTGAACCCCCCATCGAACTCTATGGACCAATCCACCAGTACCACCCCAGAAGCTGCCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAAGCTCCCATGATCAGCGATGGATGTCAATGGCGAAAATATGGACAGAAAATGGCAAAGGGAAACCCTTGTCCTCGAGCTTACTACAGATGCACCATGGCAGTGGGTTGCCCAGTTCGCAAACAAGTACAACGCTGCGCGGAGGACAGGACGATTTTGATAACCACTTATGAAGGAAGCCACAACCACCCGTTGCCACCGGCGGCTATGGCTATGGCCTCGACAACCACCGCGGCTGCCAGCATGTTGTTGTCGGGATCGATGTCGAGTGCTGACGGGCTAATGAACCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGCTCTTCTACCATGGCTACGCTTTCGGCTTCTGCACCGTTTCCGACCATAACATTGGACCTCACTCACAGTTCAAACAATAATCCATTGCAGTTCCAGAGACCTCCATTTCAGGCACCTTTCCACGGGCAGTCTCTGGTTCAAGTTCAACCAATCCCAACGGCTCAGCATCAGTTAAGTCAGGCATTTTCACAAGCACTTTACAACCAATCCAAATTCTCTGGCCTTCAGTTGTCTCATCCAGATATGGGGTTGTCTTCTTCTTCTTCTTCCCAATTTGCCCCCCAAGCATTACCGGTGCAGCCGAGCCAGCCACCGCAGCCGTCGTTGGTTGACAAGGTCAGCGCCGCCACCGCGGCCATCACCGCCGACCCGAACTTCACTGCGGCCCTCGCGGCCGCCATCTCATCCATCATTAATGGCGGCGGTCCTCATTCAAATAACAACAACAATACCAGCAGCAATCCCAATGTCACCAACGGGACCACAATCAGCAGTTTCTCTGGGAATTAA 2022 0.5079 MTSFPSRGTRRTIRGGALPFFPPFMNQSNSFLHETSPFPTERVGSETRLVNDSTLLHLKKTSQTSSPPTPSLSLAPSLLLLLPPPSPRFSSFSSLFLTIFMDKGWGLALDSSSFSNRHTMLPSSLGFPVSLTRSSTDSDHQRVVLGELDFFSDRNKHAPAASDHHPDVKTNISIPVKKENPHAEPPRLDVNTGLQLLTANTRSDQSTVDDGVSSDAEDKRAKTTTELAQLQEELQRMNEENQRLKDMLSHVSNNYTALQMHLAALTQQQQQQQQIQRTQSTEHEVVQAKADDKREIVPMPLLELGPSRTAEVDNEVSNSSSDERTRSTSPPHNNNNGKSEITAREESPDSDIQPQGWGNGPNKLQKLNPPSNSMDQSTSTTPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGLMNPNLLARAILPCSSTMATLSASAPFPTITLDLTHSSNNNPLQFQRPPFQAPFHGQSLVQVQPIPTAQHQLSQAFSQALYNQSKFSGLQLSHPDMGLSSSSSSQFAPQALPVQPSQPPQPSLVDKVSAATAAITADPNFTAALAAAISSIINGGGPHSNNNNNTSSNPNVTNGTTISSFSGN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1480 673 Gene3D WRKY domain 387 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g1480 673 MobiDBLite consensus disorder prediction 199 221 - -
Dere10g1480 673 FunFam probable WRKY transcription factor 31 387 464 - -
Dere10g1480 673 MobiDBLite consensus disorder prediction 641 673 - -
Dere10g1480 673 Coils Coil 213 254 - -
Dere10g1480 673 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 192 655 IPR044810 GO:0003700
Dere10g1480 673 SMART WRKY_cls 402 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1480 673 MobiDBLite consensus disorder prediction 582 613 - -
Dere10g1480 673 MobiDBLite consensus disorder prediction 311 341 - -
Dere10g1480 673 ProSiteProfiles WRKY domain profile. 397 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1480 673 MobiDBLite consensus disorder prediction 582 601 - -
Dere10g1480 673 MobiDBLite consensus disorder prediction 284 298 - -
Dere10g1480 673 MobiDBLite consensus disorder prediction 273 396 - -
Dere10g1480 673 MobiDBLite consensus disorder prediction 348 385 - -
Dere10g1480 673 Pfam WRKY DNA -binding domain 404 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1480 673 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g1480 673 MobiDBLite consensus disorder prediction 643 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1480 Dere-ChrDere10 26865690 26868623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1480 101 654 WRKY Transcription Factor Family AT1G62300 49.351 1.98e-155 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere10g1480 WRKY 7.4e-24 CL0274