Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1465 ATGGAGGTTTATTGCTCAAGTGCTTTTGAAGTTTCAAAGAAGAGAAAGATTCAAAAGAGTCATAAGTGCACTCCAATGTCGGAAGGAGAAAATGATGACATTCTATGGTGTCCAAAGAAAAGGGCTAAACGTCCATGCAAGAGAGGTGATCAACCAAAGAAGTTTATTGCTACCTCAAAAAGGAAAAGAAATATGCACAATGATTTCATTATTGATGATTTGGAAGAAGATGATGAAGAAGCCTTGGTTTCCTTAAAGATAAGGTCCAGCAAAAGAGCTCGTAAAATGGACACTATGATGGATCAAATATGCATAGAATCAAACGGAGAGAGTCCATACTCAAGCATTACCAGATCGCATTCTTCATCTGCTTCCACATCGTCTATTTCTGATTCAAGAAACCGTACTAAGGACAATGACACTGCAACAAGTATGAGGGGTACTAAACAAGATGGCTTGATATGTCATCAGTGCATGAAAAAGGAGAGAAGAATTGTTGTCCCTTGCACTAAATGTGAAGAGAAATTGTATCCTCATATGTCAGAGGAAGAAATTGCAGAGAGTTGCCCATTTTGCCGCAAAAATTGCAATTGCAATGTCTGCTTGCGTTCAAGTGGGATAATTAAGACATCTATGAGGGACATTTCTGATAATGAGAAGGTTCAGTATCTGCAATATTTAATCAACTTAGTCCATCCATTTCTGAAACAAATTTGTGAAGAACAAGCTTTAGAGGAAGAGATTGAAGCTAGAATTCAAGGAACATCCTGTTCTGATATAAAAATACTGCAAACTCTATGTAGTGATGATGAACGTGTCTATTGCGACCATTGTGCTACTTCAATTGTTGACCTTCACCGAAGCTGCCCTGAGTGTTCCTATGAACTCTGCCTCCAATGTTGCCAAGAAGTTCGCAATGGAACTATTTCACCCCAAGCTGAAATAAAATTTCAATATGTGAATAAGGGTTATGATTATATGCATGGTGGTGATCCTCTGCCAGGGTCTGGCGATTCCAAGACTTCAGATGATCCTTGTATTGAGCTATCCAGTGAGTGGACTGCAAAAAGCAATGGAAGTGTTTGTTGTGCCCCAAAAGAGGTGGGGGGCTGTGGGAACTGCGTTTTGGAGCTCAAGCACATATTTCCACGGGGTTGGATATCTGCCTTGGAAGCTAATGCTCGTGATTTTTTAAGAAATTGTGAAACTGACCAACCTCCTCTTAAGCAGAAAGATGCAGCAACATCAAGCTGCAGCAACTCCGTCAGAAAAGCAGCTTCTAGAGAAGGCAATGATGACAATGACATATACTGTCCCTCTTCAAGGGACATTTTAAATGAGGGGTTATCAATTTTCCAAAAGCATTGGGGAAATGGTGAACCAATTATAGTCTGTGATGTTCTTCAACAAGCAACAGGTTTGAGTTGGGAGCCGATGGTTATATGGCGGGCAGTATGTGAAAATTTGGATTCAAACATTAACTTGAAAATGTCAGAAGTAAAGGCCATTGATTGCCTAGCTGGTTGTGAGGTAGAAATTAACACTCGGAAGTTCTTTAAAGGTTATATGGAAGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTTAAAGACTGGCCTCCCTCTGACAAGTTTGAAGATCTTTTGCCTCGACACTGTGATGAGTTTATCCGTTCCTTGCCATTCCAAGAGTACACTGATCCTCGGGCTGGAATCCTCAATCTTGCTGTCAAGTTGCCAATGCATGTCAATAAACCTGACATGGGTCCAAAAACATATATAGCTTATGGAGTTAAAGAAGAACTAGGCAGAGGAGATTCTGTAACAAAGCTTCATTGTGATATGTCGGATGCAGTGAATATTTTGACCCATACAGCAGAGGTAAAGTTAGACGATGAACAACGCTTGTCTATTTTAAAGTTGAAAAAAGCACACAAGGCCCAAGATAAGAAAGAGCAACAGATAGAAGATAAGGAATTCTCAGAATTTACAGATGCAGAGAAGTGTTGTGCTGAAATCAATAGAAATATCTCTCCAAATGATGTGCTGGAAGGGGTCACTTCTCCTGATGTCACTGCAGAAGATGAGACAAGAGAAGCAGGTTCTGCTCTTTGGGACATCTTCCGAAGAGAAGATACTGAGAAGTTAGAAACATACTTAAGAAAACACTCAAAAGAGTTCAGACATACTTATTGTTCTCCAATTGAACAGGTTGTCCATCCAATTCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAAGTTGAAGGAAGAGTTTGGTGTTGAACCATGGACATTTGAGCAAAAACTTGGGGAAGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTCCGAAATCTCAAGTCATGCACAAAAGTTGCTGCAGACTTTGTGTCCCCAGAAAATCTCCATGAGTGTCTGCGTTTAACTAATCAGTTCCGTCAGCTTCCCAAAAACCATAAGTCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCAGCTGACCAAGCTCTTAAAGATTTAGAATCCTTACTCAAGTGTTGTTCTTGA 2571 0.4018 MEVYCSSAFEVSKKRKIQKSHKCTPMSEGENDDILWCPKKRAKRPCKRGDQPKKFIATSKRKRNMHNDFIIDDLEEDDEEALVSLKIRSSKRARKMDTMMDQICIESNGESPYSSITRSHSSSASTSSISDSRNRTKDNDTATSMRGTKQDGLICHQCMKKERRIVVPCTKCEEKLYPHMSEEEIAESCPFCRKNCNCNVCLRSSGIIKTSMRDISDNEKVQYLQYLINLVHPFLKQICEEQALEEEIEARIQGTSCSDIKILQTLCSDDERVYCDHCATSIVDLHRSCPECSYELCLQCCQEVRNGTISPQAEIKFQYVNKGYDYMHGGDPLPGSGDSKTSDDPCIELSSEWTAKSNGSVCCAPKEVGGCGNCVLELKHIFPRGWISALEANARDFLRNCETDQPPLKQKDAATSSCSNSVRKAASREGNDDNDIYCPSSRDILNEGLSIFQKHWGNGEPIIVCDVLQQATGLSWEPMVIWRAVCENLDSNINLKMSEVKAIDCLAGCEVEINTRKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRAGILNLAVKLPMHVNKPDMGPKTYIAYGVKEELGRGDSVTKLHCDMSDAVNILTHTAEVKLDDEQRLSILKLKKAHKAQDKKEQQIEDKEFSEFTDAEKCCAEINRNISPNDVLEGVTSPDVTAEDETREAGSALWDIFRREDTEKLETYLRKHSKEFRHTYCSPIEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENLHECLRLTNQFRQLPKNHKSREDKLEIKKMIVYAADQALKDLESLLKCCS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1465 856 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 59 852 IPR045109 GO:0032454|GO:0033169
Dere10g1465 856 FunFam Transcription factor jumonji domain-containing protein 433 827 - -
Dere10g1465 856 MobiDBLite consensus disorder prediction 110 132 - -
Dere10g1465 856 SUPERFAMILY Clavaminate synthase-like 451 849 - -
Dere10g1465 856 SMART cupin_9 551 818 IPR003347 -
Dere10g1465 856 Pfam JmjC domain, hydroxylase 698 801 IPR003347 -
Dere10g1465 856 ProSiteProfiles JmjC domain profile. 570 818 IPR003347 -
Dere10g1465 856 MobiDBLite consensus disorder prediction 110 146 - -
Dere10g1465 856 Gene3D Cupin 438 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1465 Dere-ChrDere10 26738184 26742544 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dere10g1465 JmjC 1.7e-14 CL0029