Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1463 ATGACCACACAACCATACCCAAAAAGCACACCCTTACTATTCTTCCTCGTTCTTCTTCTCTTTCAGTTATGGATTCACAGAGCCGAAGCCAAGTGCAGGCCCAGGCATGGCTGCAAACTAGCTTTAGCTTCCTACTACGTCGCAGAAGAAGGCACGAACCTCAGCTACATCGGCCATCTCTTCGGCCTTCCAATTCCTGACATTCGCAAATACAATCCCAATCTCCAAAACCCTAACATCCTCCTCCCACCCCAAATTCGACTCCGCTTGCCCTTCGCGTGCGATTGCTTGAACGAGGACTTCCTAGGTCACACCTTCTCCTACACCGTGCAATACGGCGATACCTACACGAGAATTGCTCAGAAGGCTTTCGCTGATCTCACCAACGAGTACTGGCTGAGCAGAGTGAACCTTCTCGAACCCTCCCACATAGCCGACGGAACCCGGATCAATGTTACAGTGAATTGCTCCTGCGGCAATAGACACGTGTCCAAGGATTACGGGCTGTTCTTGACGTATCCGCTTCGGCCCGGCAACGGATTGTCGGAGGTTGCGGCGGAGAACGGTGTTCCTGCGGAGTTGCTTCGGAGGTACAATCCTGAGTCCGATTTCAGTGCCGGCCTGGTGTTTGTGCCAGCTAAAGGAATGTCTGGTGGAACCATTGCCAGTATAGTCGTTGGAAGCACTGCTGGGGCCTTACTAGTGCTATATTTCGGGCTATACAGAAGAAGGATAGTAAAAGAACCATCCCTTCTCCTATATCCCCAAGCATCCGAAGATAAGTATAATATATTTGGACATCATTCTGGAAGCAGCTCTGAGAAGACATCAAATTGTGTTGATGGTGCTTCTTCAAGGTTGACAGGTATTACAGTGGACAAGTCAGTGGAGTTCACATATGAGGAGCTTGCTAAAGCTACTAATGACTTTAGTATGGCTAATATGATTGGACAAGGTGGCTTTGGATCTGTTTACTATGCAGAGATTCGAGATGAGAAAGCTGCAATTAAGAGGATGGATATGCAAGCATCCAAAGAATTCCTTGCTGAATTGAAGGTTCTGACTCATGTCCATCACTTAAACTTGGTACGTTTGATAGGATATTGTGTTGAGAACTCCTTATTTTTGGTTTATGAGTACATTGAGAATGGCAATTTAAGCCAACATTTACGCGGCCCAGAGAGGGAACCATTATCATGGTCAAGTAGAGTGCAGATTGCCCTGGATGCAGCAAGAGGACTAGAATACATCCATGAGCATACAGTTCCTGTCTACATCCATCGAGACATTAAATCCCCTAACATTTTAATTGACAAGAACTTTCGTGGAAAGGTCGCAGATTTTGGTCAGACAAAATTGACAGAATTTGGAAGTTCTTCAATGCCATCACATCTTGTGGGTACTTTTGGCTATATGCCTCCAGAATATGCAAAATACGGTGACGTTTCGCCCAAAATAGATGTATATGCTTTTGGAGTCGTGCTCTATGAACTCATATCTGCAAAGGAAGCTATTGTGAAGACAAATGAGCCTGTGAATGAATCAAAGGGACTCATTGCCTTGTTTGAAGAGGTTCTTAATCAGCAAGACCCCAAAGAAGATGCTCGTGAGCTTGTTGATCCCAGGCTTGGTGAAAACTATCCTCTTGACTCAGTATATAAGATGTGTCAGCTAGCAAAAGCATGCACACACGAAAATCCTCAACTAAGGCCAAGCATGAGATCAATCGTAGTGGCATTGATGACACTTTCGTCTCCAACAGAGGACTGGGACGTTGGATCTTTCTATGAAAACCAAGCTTTGATTCATCTCATGTCTGGAAGGAATGCAATAATTGCAGTTGCTATTATTGTCTTTGATGATTATAATTCCATGCAACCCCTACCACCAAAGGGAAAAGCCTCTCTATCAGTCTATCACTCACACTGTTGGTGTAGCTCACCTACAAGCAATCGAATAACGAACACTGCCTTTGTTCTTTTCTTTCTGTATGCCTCCAATGCCCACAAATTCCTCTGTTTCTTTATTACTTCCCTGTTTCTGAGAAGAGCTGTTAATTGCTTGGTGTCTCAACGAGGAAAGGGGCTGACAGTAGCGTGTGTTCTACGTAGATTTCACTGGAAAAAGGGGTTCGAATCTTCTTGCTTCGTTCGGTTTCGAAGATATCCTAACACCCTTTTGTCAAAGACTTCGATCTTGAGCTTCAGGTTTCTGTCATTTAAGGATTATTCTGTACTTGGGATTTCCTTACCTCGACCAAATTGTGAGGGACACGCTCAAAGTTTGGGGGAGAGATTATCATTTCTTTCTCTTCTTGCTTACTGCTCAATACTAGTTGATTTGGATTACATTTGGACCGAGTTAGAATTTGATTTGCATAATTTGGACAAACTCCTTTGA 2400 0.4425 MTTQPYPKSTPLLFFLVLLLFQLWIHRAEAKCRPRHGCKLALASYYVAEEGTNLSYIGHLFGLPIPDIRKYNPNLQNPNILLPPQIRLRLPFACDCLNEDFLGHTFSYTVQYGDTYTRIAQKAFADLTNEYWLSRVNLLEPSHIADGTRINVTVNCSCGNRHVSKDYGLFLTYPLRPGNGLSEVAAENGVPAELLRRYNPESDFSAGLVFVPAKGMSGGTIASIVVGSTAGALLVLYFGLYRRRIVKEPSLLLYPQASEDKYNIFGHHSGSSSEKTSNCVDGASSRLTGITVDKSVEFTYEELAKATNDFSMANMIGQGGFGSVYYAEIRDEKAAIKRMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVENSLFLVYEYIENGNLSQHLRGPEREPLSWSSRVQIALDAARGLEYIHEHTVPVYIHRDIKSPNILIDKNFRGKVADFGQTKLTEFGSSSMPSHLVGTFGYMPPEYAKYGDVSPKIDVYAFGVVLYELISAKEAIVKTNEPVNESKGLIALFEEVLNQQDPKEDARELVDPRLGENYPLDSVYKMCQLAKACTHENPQLRPSMRSIVVALMTLSSPTEDWDVGSFYENQALIHLMSGRNAIIAVAIIVFDDYNSMQPLPPKGKASLSVYHSHCWCSSPTSNRITNTAFVLFFLYASNAHKFLCFFITSLFLRRAVNCLVSQRGKGLTVACVLRRFHWKKGFESSCFVRFRRYPNTLLSKTSILSFRFLSFKDYSVLGISLPRPNCEGHAQSLGERLSFLSLLAYCSILVDLDYIWTELEFDLHNLDKLL 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1463 799 Pfam Protein tyrosine and serine/threonine kinase 312 579 IPR001245 GO:0004672|GO:0006468
Dere10g1463 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Dere10g1463 799 SMART LysM_2 107 153 IPR018392 -
Dere10g1463 799 SMART LysM_2 45 91 IPR018392 -
Dere10g1463 799 FunFam LysM receptor kinase 2 289 380 - -
Dere10g1463 799 Gene3D Phosphorylase Kinase; domain 1 295 380 - -
Dere10g1463 799 ProSiteProfiles LysM domain profile. 106 152 IPR018392 -
Dere10g1463 799 ProSitePatterns Protein kinases ATP-binding region signature. 316 337 IPR017441 GO:0005524
Dere10g1463 799 Gene3D Transferase(Phosphotransferase) domain 1 381 589 - -
Dere10g1463 799 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1463 799 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 18 594 IPR044812 GO:0019199|GO:0045087
Dere10g1463 799 FunFam PTI1-like tyrosine-protein kinase 3 381 594 - -
Dere10g1463 799 SUPERFAMILY Protein kinase-like (PK-like) 290 580 IPR011009 -
Dere10g1463 799 ProSiteProfiles Protein kinase domain profile. 310 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1463 Dere-ChrDere10 26709847 26724768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1463 17 608 Receptor kinase-like Gene Family AT3G21630 54.443 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere10g1463 PK_Tyr_Ser-Thr 1.3e-44 CL0016