Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1462 ATGGTAGACACCCGTCTGGCCTTTTCTCTTCTTCTCGCTGAGTTTATGTCAATCGCTTTGATCTTCGCTTTGCGTCCTCTTGCTCTCGGCAAAACTGACCCTTCTGATGTTCAAGCACTTGTGATTATGTACAACACGTTGAATAGTCCCTCTCAGCTAACAGGCTGGAAAATCAGTGGTGATCCATGTGGAGAGGATCTATCATTCAATAACTTCTCTGGTGATCTTCCTAGTTCATTTGGTTCACTGTCCACTCTGTCTTCTCTAAATGTTGCAAACAACCATTTTAGTGGACAAATACCTCATGAGCTTATTTCTATCCCAAATTTTATATTTGATGGAAATTCTTTGGACAATGGTGCTGCTCCTCCTTTGTCACCATCGACACCTCTTGCTCCCTCTCATAATAATCATCACCATTCTGGATCTGCTTCACATAAACCACAAGGTTCTGACAGTGAAAACTCTGATGGCAATAATGGTTTGAAAACCAGGGCAATTCTAGGCATCGTATTGGCTTTAGTGTCTCTGGCAGTTATTATGCTACTTGCTCTTGCTATGTTAACTCCTCATATACATGAACATGGGGTAAAAAGTGCTGCTGTTATTACAGATCTCAAGCTTCCTCCTGCAGAAAAAAGGAATGGAAATTTAAACGATATGCTCCATTTTGCTGATGATAGCAGTAAGGCTTTATCTTGGAATGCCCTAGTCCGGATAGCACTTGGCACAGCCCGAGCTTTAGAGTACTTGCATGAAGTTTCAACTCAGATGGTTAGTTCATTTGGTTATAGTACTCCTGAGTTTGCATTATCAGGAATATATTCTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTCATGTTGGAGCTATTGACTGGTTGGAAGCCTCTTGACAGATCAGAGCAGTCACTTGTGAGGTGGGCAACTCCTCAGCTCCATGACATTGATGCCTTGGCCAAAATGGTTGATCCTGCTATGAATGGCATGTATCCTGCAAAGTCATTGTCGCGCTTTGCAGATATCATTGCCCTGTGTACAGGTTAG 1047 0.4241 MVDTRLAFSLLLAEFMSIALIFALRPLALGKTDPSDVQALVIMYNTLNSPSQLTGWKISGDPCGEDLSFNNFSGDLPSSFGSLSTLSSLNVANNHFSGQIPHELISIPNFIFDGNSLDNGAAPPLSPSTPLAPSHNNHHHSGSASHKPQGSDSENSDGNNGLKTRAILGIVLALVSLAVIMLLALAMLTPHIHEHGVKSAAVITDLKLPPAEKRNGNLNDMLHFADDSSKALSWNALVRIALGTARALEYLHEVSTQMVSSFGYSTPEFALSGIYSVKSDVYSFGVVMLELLTGWKPLDRSEQSLVRWATPQLHDIDALAKMVDPAMNGMYPAKSLSRFADIIALCTG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1462 348 MobiDBLite consensus disorder prediction 131 158 - -
Dere10g1462 348 Gene3D Ribonuclease Inhibitor 33 118 IPR032675 -
Dere10g1462 348 MobiDBLite consensus disorder prediction 122 158 - -
Dere10g1462 348 Gene3D Transferase(Phosphotransferase) domain 1 257 348 - -
Dere10g1462 348 SUPERFAMILY Protein kinase-like (PK-like) 215 347 IPR011009 -
Dere10g1462 348 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 262 347 IPR046959 -
Dere10g1462 348 Gene3D Transferase(Phosphotransferase) domain 1 214 256 - -
Dere10g1462 348 Pfam Protein tyrosine and serine/threonine kinase 260 307 IPR001245 GO:0004672|GO:0006468
Dere10g1462 348 SUPERFAMILY L domain-like 66 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1462 Dere-ChrDere10 26689706 26696090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1462 215 346 Strubbelig Receptor Gene Family AT4G22130 62.147 1.16e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dere10g1462 PK_Tyr_Ser-Thr 1.6e-06 CL0016