Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1450 ATGAGCTGCCTATGCACACACAACTTGCTAAATGCATCACTTGCCCAGCAGTTTAGACACCTTAGAAGACCCAAAAAGAACTTGAACAAGCTCAAGTCATTAATGGAGGAGTTAGATGCCAGGAAGGTAGATGTGAGCACCAAGCTAAAGCAAATGTGGCTATGGAAAGGGATGAATCCCAAGGCAGCTGTAGAATTATGGCTGAAAAATGTTGAGAACTTTTCAAGTGAAGCAAGTAAGCTCATAAGGGAGATTGAGCAAGATACTGGAAGATCAGGTGTGTTTTCACCATGCTATGTTTGTTCAAGAATAAAATTGGGAAAAATCATTGAAAAAAAGGTCTTACAGGTGAGAGAGCTTCTTGAGAAGGGTCAATTTTCAGATGATTTGTTGGCTGAAACTTCACCCAGAAAAGGACACATTCTTCCCACAGAAAAATTGATTAAACATGGATCAACCATGAAAAGTTTAAGCAAAATTTGGAAGTTCTTATTAGATGAAAGAGTGGGAAAAATCGGTGTTTATGGGATGGGTGGTGTGGGGAAAACGACAATCATGACAGAGATTAACAACCTTCTGTTGGAAGAAGATAGACTTTTTGATTGTGTCATATGGGTTAGTTCTCCAAAAAAAACTAGCCCTGAGAAATTACAGAAGGCTATTGCGGAGAAGTTTGATTTAGATCTTTCAAGATATCAAGATGAGACTACAAGAGCTGCTTTACTGTTTGAAGCTTTCCAAAGAAGGAAGAGATTTGCTTTGATGCTTGATGACTTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCTACGCCAACCATAGAAAATGGATGCAAATTGGTGATAAGCACTAGACAGTTGAGTGTTTGTAGAGGCATGGAGACAGACAGGGATGTAGAAGTGAAGGTTCTTGCTGACAATGAAGCATGGGATCTCTTCATTAACAAAGTTGGAGATGAAGCACTGGCTTCTCCAAATATAGAGAGAATTGCAAGAGATGTGGCAAAAGAATGTATGGGTTTGCCTCTTGGCATAATCACAGTGGGTAGGGCTTTAAGAAATGTTGCTGATGCTTCAGAATGGGAGATTGCATTGCTACGGCTAAAAGCTTCATCAGTCAACATAGAACAAATGGAAGAGTCAGTTTTCTCTCGTTTGAAGTTTAGTTTCACAAGACTGAAGGATGACACAAGCAGATCTTGCTTCCTTTTTTGTGCACTATACCCAGAGGGCAATCATATTGATGCAGATGAACTGATTGAGTATTGGATGTGGGAAGGTTTATTGGGCTCTGTGGACAAAATATGGGAAAGCAAACAGAAGGGGAGAACTATGTTGAATGAGCTGAAATATGCATGCTTGTTGGAAACTGCAGAAGAAAAGGTGAGAGACCATATAAAAATGCATGATTTGATTAGAGATATGGCCATCAGAATCATGAGAACAGATCGTCAATGGCACTGTATTGTAAAAGCAGGAAATGGATTAACGAAACCACCACAAATTAATGAATGGGTAGGAGATGTTCAAAGGGCGTCACTGATGAAAAATGACTTGAAAAACATCCACCTTGGTAACCCTCCACCATGTCCAGAAGCAACTTCCTTGTTATTGCAATATAATTCTTTCCCTCAAAATATACCTCATGATTTCTTTGACTTCTTACAAGGCCTGAAGGTTCTTGACCTCTCTTATACGGGGATCGATTCCCTGCCTGGATCGGTCTCTAACTTGGAGAACCTATGTGCCTTGTTAATGAGCAACTGCTGGAATTTAAGAGCAGTCCCTTCTCTAGCGAAACTCATTAAGCTTATGGCTTTGGATCTCTCATGTTCTAGAAACATCAAGCAACTTCCTCACGGAACAGAACAACTATGCAACCTCAGACGACTAAATATCTCAAATACTATGATCAAAAGCTTGCCATCTGGGTTGCTCTCAGCATTAACTCTTCTAGAAGAACTGTTGGTATGTAATGCTCTTGAGTTTCAAATACCATTGCCTCCAACCAGTGCTGAAATCAGCATTGATGAATTGATATCCTCCTCAAGATTATCTTATGTTGAAGTGGACTTTTGGAGTTTTGAACTTTATGATCTATACATTAGATCAGGTCACTGGGCTCAGCTAGATAAGTTCAAGTTCAATGTTGGACCTGGAGAGATCCAAGAAGTCTCAGAGAAAAGAAGTATATCATTTCTGGGGATACCTGTTAGAACTCCCATTTTAATCCCTGATAATACTGTTGAGTTGAAGATTTATGATTGCCATGATATTACAGGGCTAACTACTAGGCTTGTTAATGCAGAGAAGCTAACAAAATGCACATTAGTATGCTGTTACAGTATAGAAAGCATCGTTGATCTTGGACAAAACGATTTGTCTATGCTGGAGACAATGGTTCTGAGGTTTTTGATGAATTTGAGGATGATTTGCAGGAAAGTGGTGACACAATCTACTCTTATGAGCCTGAAGATCGTTAGTGTAGAATACTGTCCAAATTTGAAGAATCTATTTTCAGGGCACCTCTTGCTGCAACTTCTAAACCTTGAAGAAATAAGAGTGAGCCATTGTGACAGTATGGAGGACTTGATGAGATGGGAAGAAGAAGATAATATTCATGCAGCAAAAATCCTCTTTCCGAAACTAAAGAAGTTGAGGTTGGAATTTATGCCTAAACTAATAGGAATATATGGTGGGTTCATCAGTTTTGGTTCTTCATGCTGTGTTCAAGTCATTTCTTGCGATGCTCTCAAGAGGCTACCCTTTGATCTTGATGATGTAGTTTGCAATTCTTTGGAAATCAAAGGATCAAAATATTGGTGGGAGTCACTTGATTGGGATGAGCCTTCTGCCAAGGAAATAATGGAAGCTTATTTCTTAGAGCTGCCAATAAGTGTATCAGATCATGTTGCTACTACTAGTAGCAGCAAAGCAGGTTTGGATAATGCATAG 2958 0.3945 MSCLCTHNLLNASLAQQFRHLRRPKKNLNKLKSLMEELDARKVDVSTKLKQMWLWKGMNPKAAVELWLKNVENFSSEASKLIREIEQDTGRSGVFSPCYVCSRIKLGKIIEKKVLQVRELLEKGQFSDDLLAETSPRKGHILPTEKLIKHGSTMKSLSKIWKFLLDERVGKIGVYGMGGVGKTTIMTEINNLLLEEDRLFDCVIWVSSPKKTSPEKLQKAIAEKFDLDLSRYQDETTRAALLFEAFQRRKRFALMLDDLWEPFSLERVGIPTPTIENGCKLVISTRQLSVCRGMETDRDVEVKVLADNEAWDLFINKVGDEALASPNIERIARDVAKECMGLPLGIITVGRALRNVADASEWEIALLRLKASSVNIEQMEESVFSRLKFSFTRLKDDTSRSCFLFCALYPEGNHIDADELIEYWMWEGLLGSVDKIWESKQKGRTMLNELKYACLLETAEEKVRDHIKMHDLIRDMAIRIMRTDRQWHCIVKAGNGLTKPPQINEWVGDVQRASLMKNDLKNIHLGNPPPCPEATSLLLQYNSFPQNIPHDFFDFLQGLKVLDLSYTGIDSLPGSVSNLENLCALLMSNCWNLRAVPSLAKLIKLMALDLSCSRNIKQLPHGTEQLCNLRRLNISNTMIKSLPSGLLSALTLLEELLVCNALEFQIPLPPTSAEISIDELISSSRLSYVEVDFWSFELYDLYIRSGHWAQLDKFKFNVGPGEIQEVSEKRSISFLGIPVRTPILIPDNTVELKIYDCHDITGLTTRLVNAEKLTKCTLVCCYSIESIVDLGQNDLSMLETMVLRFLMNLRMICRKVVTQSTLMSLKIVSVEYCPNLKNLFSGHLLLQLLNLEEIRVSHCDSMEDLMRWEEEDNIHAAKILFPKLKKLRLEFMPKLIGIYGGFISFGSSCCVQVISCDALKRLPFDLDDVVCNSLEIKGSKYWWESLDWDEPSAKEIMEAYFLELPISVSDHVATTSSSKAGLDNA 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1450 985 PRINTS Disease resistance protein signature 171 186 - -
Dere10g1450 985 PRINTS Disease resistance protein signature 246 260 - -
Dere10g1450 985 PRINTS Disease resistance protein signature 339 353 - -
Dere10g1450 985 PRINTS Disease resistance protein signature 600 616 - -
Dere10g1450 985 Pfam NB-ARC domain 155 391 IPR002182 GO:0043531
Dere10g1450 985 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 923 - -
Dere10g1450 985 SMART LRR_typ_2 626 649 IPR003591 -
Dere10g1450 985 SMART LRR_typ_2 556 579 IPR003591 -
Dere10g1450 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 406 IPR027417 -
Dere10g1450 985 Gene3D Ribonuclease Inhibitor 484 925 IPR032675 -
Dere10g1450 985 FunFam Probable disease resistance protein At1g61300 144 299 - -
Dere10g1450 985 Gene3D - 131 302 IPR027417 -
Dere10g1450 985 Pfam Leucine rich repeat 534 590 IPR001611 GO:0005515
Dere10g1450 985 Coils Coil 28 48 - -
Dere10g1450 985 FunFam Probable disease resistance protein At5g66910 304 390 - -
Dere10g1450 985 Gene3D - 391 479 IPR036388 -
Dere10g1450 985 FunFam Probable disease resistance protein At1g63360 391 479 - -
Dere10g1450 985 Gene3D - 304 390 IPR042197 -
Dere10g1450 985 SUPERFAMILY L domain-like 466 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1450 Dere-ChrDere10 26457752 26460709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1450 172 637 WRKY Transcription Factor Family AT5G45050 24.000 1.25e-15 80.1