Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1404 ATGCAAACGTCTCAGAAACACCCTAGTTCAGCTGGTTTCCATTTGTACCACGAGCCAATGCAAGACATAGATCCATACCATTTGTCTAATTACCAAATTTTGCAAAGCAATTCATACCACAACACCCATGATAATAACAGCCAGGGAACCACTGTTTCTTTTGAAACCTACAAGCAGCAATACTTTACCCTGGAATCATCCCCAGCAACCACTGGTCTTATAGCTTGTGATTCACCTTCCTTTGCTAGCGTATCATCTAATAGGAGTCCTTTTTCTCCGCAAGGTTCGCAAACTCAGTCATGCCATTCAGATCAGCACCAGTCCTCGGACAACACCTATGGATCACCAATGAGCGGGTGCTCGAGTGCTGAGGGCGGCATTGATTGGAAACACAAACTTAAGGAATTGGAGAATTCATTGTTGGGGCCTGAATCGGATATTGATGACAGTAATTACTGCTACTTCAAGGATGGCCATCACCAAACATCTCCAACGTCTGGGTGGGACTGGGATCGGATTGTAGACATAATTCCTAAGTTAGACTTGAGAGAAGTTCTCATTGCTTGTGCACATGCTGTGTCTGATGGTGATTTTCAAACGGCAGCACGATGGATGGATAAAGTATTGGTAAAGATGGTGTCGGTTTCTGGGGATCCAATTCAAAGGTTGGGTGCTTACATGTTGGAGGGGCTTAAAGCGAGGTTGCAATCATCAGGCAGTATAATCTACAAGTCCTTGAAGTGTGAACAAGAACAACCACCAACAAGCAGAGAACTATTGACTTACATGGGCATCCTCTATAGGATTTGCCCATATTGGCCGTTTGCTTATACATCTGCAAATGCTGTCATCTTAGAAGCAATGGAAAATGAATCCAGAATTCATATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGAAGATACTTATGCAGGCTCTTGCACGTCGGCCTGGTGGACCTCCATTCATTCGCATAACTGGTGTTGACGACTCCCAATCATTTCATGCTCGAGGTGGAGGGCTTCATATTGTAGGAGAGCAGCTGTCAAATCATGCGCGGTCTCTTGGAGTGCCATTTGAGTTCCGTAGTGCAGCCATGTCTGGCTGTGAGGTTCAACAAGAGAACCTTGGAGTTCGACCTGGTGAGGCCCTGGCTGTAAATTTCCCTTATGTTCTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGAGACAGGCTATTGAGATTAGTCAAGAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTACCAAAGGTTTCTTGAGACACTAAGTTATTACACCGCTATGTTTGAATCAATTGATGTGGCCAGCTCTAGAGATGATAAGGAACGGATTCGTGCAGAGCAGCACTGTGTAGCTCGAGATATTGTCAACATGATAGCTTGTGAGGGGAAAGAGAGGGTAGAAAGGCATGAACTTTTGGGGAAGTGGAGGTCAAGATTTGCCATGGCCGGGTTTAAGCAATGCCCATTGAGTTCCTCGACTGCAGTTGCAGTACAAAATTTATTGAAGGGTTTTAAAGAAAATTATAGGCTTCAATATAGAGATGGTGCTCTTTATCTTGGCTGGATGAACAGAGATATGGCCACCTCTTCTGCATGGAGGTGA 1671 0.4506 MQTSQKHPSSAGFHLYHEPMQDIDPYHLSNYQILQSNSYHNTHDNNSQGTTVSFETYKQQYFTLESSPATTGLIACDSPSFASVSSNRSPFSPQGSQTQSCHSDQHQSSDNTYGSPMSGCSSAEGGIDWKHKLKELENSLLGPESDIDDSNYCYFKDGHHQTSPTSGWDWDRIVDIIPKLDLREVLIACAHAVSDGDFQTAARWMDKVLVKMVSVSGDPIQRLGAYMLEGLKARLQSSGSIIYKSLKCEQEQPPTSRELLTYMGILYRICPYWPFAYTSANAVILEAMENESRIHIIDFQIAQGTQWKILMQALARRPGGPPFIRITGVDDSQSFHARGGGLHIVGEQLSNHARSLGVPFEFRSAAMSGCEVQQENLGVRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFYQRFLETLSYYTAMFESIDVASSRDDKERIRAEQHCVARDIVNMIACEGKERVERHELLGKWRSRFAMAGFKQCPLSSSTAVAVQNLLKGFKENYRLQYRDGALYLGWMNRDMATSSAWR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1404 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 546 IPR005202 -
Dere10g1404 556 MobiDBLite consensus disorder prediction 85 119 - -
Dere10g1404 556 Pfam GRAS domain family 182 556 IPR005202 -
Dere10g1404 556 ProSiteProfiles GRAS family profile. 173 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1404 Dere-ChrDere10 25893828 25895498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1404 1 556 GRAS Transcription Factor Family AT4G17230 59.358 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere10g1404 GRAS 2e-126 CL0063