Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1396 ATGGAATTTTCTCTCATGCTCCTTATTTTCTTCCTCTTCTTCTTCTTCTTCCTTTGGCTCGCAAAGCCAAAAAATAAAGCTAAGGTTGTAGTCCCAGGGCCATGGAAGCTTCCTGTGTTAGGAAACCTTCATCAGTTAGCAGCAGCAGCAAGGTCTTCACTTCCACATCATGCCCTTCGCAAACTATCCCTCAAGTATGGGCCTCTCATGCACCTTCAACTTGGTGAGCTTTCCACAATAATTGTTTCATCCCCAGATGTGGCCAAGCAGATTATGAAGACACATGATCTTGCCTTTGTCCAGAGGCCAGAAGTTTATACTTCTGAACTTCTTGGGTATGGGTCAGCTAACATTGCTTTTGCTCCGTACGGTGAATACTGGAGACAGATGAAGAAAATATGTACTTTAGAGCTCTTGAGTGCCAAGAAGGTTCAGTCTTTCTCCTCTGTCCGAGAAGATGAGGTATCTAAGCTCATAGAATCAGTTCAATCATCAGTGGGTTCAGATTTCGATCTCACTAGCAAGATATTCTCTTTGACTAGTGCAATTGTTACAAGGGTAGCATTTGGCAACAAGTCTAAAGATCATGAAGAGCTCTTGCACTTACTCGAACTAGCAATAACAAAATCGAGCGGGTTTAATTTTGCCGATTTGTTTCCTTCAATGAAACCTATTCATCTCCTAACTGGGCTGGAAGCAAAGTTGGTAAAGATTCATAAGAAGATTGACATGATGTTAGAGGACATTATCAAAGAAAATCGAGAGGGGGAGATGAGAGCAGAAGGAGGCGAGAGTGGCTCGAGGGAAGAAAATCTTGTTGAGGTTCTTTTACGAATCCAACGAAGTGGCAGCCTTGAGATTCCAGTTACGGACAAAAACATCAAAGGAGTCATATGGGACATATTTGCCGGTGGAACTGATACTTCAGCAACAACATTGGAGTGGGCTATGTCAGAACTGATAAGAAATCCAAAAGTGATGGAAAAGGCAAAAGCTGAGATTAGAGAAGTTCTTAAAGGAAAGAAAAAAATCCACGACGCTGATATGGACAAACTTAGTTACTTAAAATCAATAATCAAGGAAACCCTGAGGCTACACCCACCTGTTCCTTTGTTGGTCCCAAGAGAATGCAGAGAAGCTTGCAAAATTGATGGATATGAAGTACCCATCAAAACTAAAGTCATAATAAATGCGTGGGCACTAGGAAGAGATCCAAAGTATTGGTATGAAGCTGAGAGGTTCATACCAGAGAGGTTCCATGGCAATTCAGATATTGATTTTAAAGGGACAAACTTTGAGTATGTCCCCTTTGGAGCAGGAAGGAGAATGTGTCCAGGCATTTCATTCGGTTTAGCAAGTGTTGAACTTCCTCTTGCTAGCTTGCTACACCACTTTGATTGGGAAGTTCCAAATGGAATGAAACCAGATGATTTAGACATGACTGAATCCTTTGGTATTACAGTTAAAAGGCAGAATAAGTTGTATTTGATTCCCAAACGACGCAGTATTAATCCTCTTCACCATAGTTCCGATTGA 1536 0.4141 MEFSLMLLIFFLFFFFFLWLAKPKNKAKVVVPGPWKLPVLGNLHQLAAAARSSLPHHALRKLSLKYGPLMHLQLGELSTIIVSSPDVAKQIMKTHDLAFVQRPEVYTSELLGYGSANIAFAPYGEYWRQMKKICTLELLSAKKVQSFSSVREDEVSKLIESVQSSVGSDFDLTSKIFSLTSAIVTRVAFGNKSKDHEELLHLLELAITKSSGFNFADLFPSMKPIHLLTGLEAKLVKIHKKIDMMLEDIIKENREGEMRAEGGESGSREENLVEVLLRIQRSGSLEIPVTDKNIKGVIWDIFAGGTDTSATTLEWAMSELIRNPKVMEKAKAEIREVLKGKKKIHDADMDKLSYLKSIIKETLRLHPPVPLLVPRECREACKIDGYEVPIKTKVIINAWALGRDPKYWYEAERFIPERFHGNSDIDFKGTNFEYVPFGAGRRMCPGISFGLASVELPLASLLHHFDWEVPNGMKPDDLDMTESFGITVKRQNKLYLIPKRRSINPLHHSSD 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1396 511 FunFam Cytochrome P450 71D8 23 498 - -
Dere10g1396 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Dere10g1396 511 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 CDD CYP71-like 65 494 - -
Dere10g1396 511 PANTHER OS08G0105600 PROTEIN 57 500 - -
Dere10g1396 511 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere10g1396 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1396 Dere-ChrDere10 25742975 25746917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1396 5 500 Cytochrome P450 AT3G26300 40.396 4.67e-133 393