Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1353 ATGTGGGTTGTACCCCTTTCCCTTCGGTTTTTGCTTTTTGCATCTGGGTCTCCTTCTTCCTTCGAATCTGCCTCAGATTTCACTCAAACCCACGGTTCTCTGATCAAGATCCAGCATTTGCTCGCTCGTAGTAGGAATCTGGGGTTCAGTTTACTTGATTCTCTTGTATTAGTTAAGCTGTCATACGATGTAACTAGTGCTAGAGCTCCCCCGAAACAGCATCAGAAGACAGCTGGGGTACAATCAATAGAGGCAAAAGACATCAGGTCTTCTTTGCTGCAGGTTTCAAAGAAAGGCAAACCTGAATTTTCTGCACCTGAAGATGTATCAAAATCTGTTCAGAACACATCGAAGCAGTATACTGGAGAAACTTCTGAAAACAAGAAGTTGGGAATTTCAAACCAAAAGGAATCTGCCGATTCCTTGATCAGTAAATTCGGTTCTTCTGTTTCCTTGCCTGTTAATGAACAAGTATCTGGAGGAGTTGACCGTGTTGTTAATGGGAATAGAGGGTTGCAGGAAAGCTCTATTGATCAAGAAAAGAAGACATCAGAGTATGGAAGCGTGAAGAATAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTAGCAAAGACCAGTGGAAGTGCCAAGATTAGTGATCGAGCTGATTTTGTTGAGAGCGGTAAGAGCAGTATCTGCAGAGGAAGTACGAGCAGTGATGTGAGTGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAACCGCACAAGGCAAATGACTTGAGATGGGAAGCCATCCAAGCAGTCCGAGCTAAAGATGGGGTATTGGGCTTAGGTCACTTTAGACTTCTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTCTCGGAGTTGAGTGGAACTAAATGTTATTTTGCAATGAAGGTAATGGACAAAGGGTCCTTAGCAAGTCGTAAAAAGCTGCTACGTGCTCAGACAGAAAGAGAAATACTGCAGTCTCTAGATCATCCTTTTCTCCCAACTTTGTATACCCATTTTGAAACAGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTACGGCAGAGGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTCCTGTTGGCTTTGGAGTACCTCCACATGCTCGGTATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTCAGGGATGATGGTCATATTATGCTCTCTGACTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCGACTCTTGTTAAAAGCTCAACCATGGAATCTGAGGCTTTAAGAAAGAATCCTGTATATTGTGTGCAGCCTGCTTGTATTGAGCCTCCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACAACGTGCTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGAGTCCACTACCTGAGCTCATTGCAGAGCCTACTGATGCTCGTTCTATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGCGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAGCTTTTGTTTGGTAAAACTCCTTTTAAGGGGTCTGGGAATCGAGCTACATTGTTTAATGTTGTAGGCCAGCCTCTCCGATTTCCAGAATCACCTGTTGTAAGTTTTGCAGCAAGGGATCTCATAAGGGGGTTACTTGTGAAGGAACCACAGCACAGATTGGCATATAAGCGAGGGGCCACTGAGATTAAGCAACATCCCTTTTTTGAAGGTGTTAATTGGGCATTGATCCGCTGTGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAAAAGATACCATCCCCGGTCTCATCAGCTGGCGAAAAAGTTGTCAATCATATGTCAATTCCTGATCAGAAAGGTTCTGGTAATTACCTTGAGTTTGATTTCTTCTAG 2025 0.4474 MWVVPLSLRFLLFASGSPSSFESASDFTQTHGSLIKIQHLLARSRNLGFSLLDSLVLVKLSYDVTSARAPPKQHQKTAGVQSIEAKDIRSSLLQVSKKGKPEFSAPEDVSKSVQNTSKQYTGETSENKKLGISNQKESADSLISKFGSSVSLPVNEQVSGGVDRVVNGNRGLQESSIDQEKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSTMESEALRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPVSSAGEKVVNHMSIPDQKGSGNYLEFDFF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1353 674 FunFam Serine/threonine-protein kinase AGC1-7 510 635 - -
Dere10g1353 674 MobiDBLite consensus disorder prediction 226 247 - -
Dere10g1353 674 Gene3D Transferase(Phosphotransferase) domain 1 511 635 - -
Dere10g1353 674 Pfam Protein kinase domain 514 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1353 674 Pfam Protein kinase domain 280 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1353 674 PANTHER FLIPPASE KINASE 1-RELATED 102 640 - -
Dere10g1353 674 Gene3D Transferase(Phosphotransferase) domain 1 363 432 - -
Dere10g1353 674 ProSiteProfiles Protein kinase domain profile. 279 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1353 674 MobiDBLite consensus disorder prediction 225 247 - -
Dere10g1353 674 Gene3D Phosphorylase Kinase; domain 1 277 362 - -
Dere10g1353 674 CDD STKc_phototropin_like 278 636 - -
Dere10g1353 674 MobiDBLite consensus disorder prediction 161 191 - -
Dere10g1353 674 SMART serkin_6 279 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1353 674 FunFam serine/threonine-protein kinase D6PK-like 363 430 - -
Dere10g1353 674 SUPERFAMILY Protein kinase-like (PK-like) 256 646 IPR011009 -
Dere10g1353 674 MobiDBLite consensus disorder prediction 96 133 - -
Dere10g1353 674 MobiDBLite consensus disorder prediction 108 133 - -
Dere10g1353 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Dere10g1353 674 FunFam Serine/threonine-protein kinase D6PK-like 277 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1353 Dere-ChrDere10 25024943 25029053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1353 99 674 AGC Kinase Gene Family AT5G47750 77.855 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere10g1353 Pkinase 1.9e-36 CL0016