Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1307 ATGAGCGAAGAAGGCAAGAACAGGGGACTCGTCACCGATCACCCCAACCAGCCTTACTATGGCACGTTTCAAGGCGTTGCCAACTATTATCCTCCTGCTCAGCCTCCGCCGCTGCCGCAGCAGCAGCACCCACAACCTCAGCCGGTGGTCGGATTTCCTCAGGCCGTTCCGCCACCGGGAACGTACGGTGGGCCCCAGTATTATCACCAAGGATACCAAACCGTTCCAGGTTATGCTATTGATGAAGGAAGGTTTATAAGAGAACATCGTCTTCCTTGCTGTGGACTTGGTCTGGGTTGGTTCTTGTTTATAATGGGTTTCTTTCTTGGTGGCCTTCCCTGGTATGTTGGAACTTTCATTCTACTATGCGTACAGATGGATTACCGTGAAAAGCCTGGATTAGTTGCATGCACTGTTGCCTCCATCATCGCTGTCATAGCAGTTACTCTTGGTCTTACAAATAAAGCTCATGATTGGTGA 480 0.5021 MSEEGKNRGLVTDHPNQPYYGTFQGVANYYPPAQPPPLPQQQHPQPQPVVGFPQAVPPPGTYGGPQYYHQGYQTVPGYAIDEGRFIREHRLPCCGLGLGWFLFIMGFFLGGLPWYVGTFILLCVQMDYREKPGLVACTVASIIAVIAVTLGLTNKAHDW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1307 159 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 159 IPR044804 -
Dere10g1307 159 MobiDBLite consensus disorder prediction 30 60 - -
Dere10g1307 159 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1307 Dere-ChrDere10 24276417 24282104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1307 2 159 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 38.614 8.86e-36 121