Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1294 ATGGATGCAATCGATGCTATAATGCTCATATCAACAATTGCAGTATATAAAGTTATCAGATTCTTTTCTTCTTTAGTCCATATTTTCCACCCTGTCGCTGTTGATTGTTATAACGATGATGTCGTTTCAACTTCAACGATTTCTAGTTCTTCCCATGACATTAGTGTTCCTCCTCCTGCTACCAAATTTAAACACAAAGAGAAAGTGCAAATGTGGAAGGATGCTATGACCCGATCTACAAGTCTCTCTGGATGGGATTCAAAGAATATCAGGCCTGACTCTAAGTTGATTAAAATGATTGTCAATGACATTCGGAACAAGCTAAATTACTTGTCATCATGTCATTTTGACGGGTTAATTGGCATTAATCATCATATTGAGAAAATTGAAGAATTACTATATGAGGGTCGCATTGTTGGAATATGGGGAATGGCTGGCATTGGGAAGACCACACTTGCTAAAGTTATATTTCACAAGTTAAAAGCACAATTTGAGTCATTCTCCTTTGTTGAAAATGTGAGAGAAAAACTCGCAAAAATTGGATTGGATAACTTACAGGAAGAATGTCTCAAAGAATTATTGAAAGAGGATGACAATGATGTCTACCACATGAAATTCACATCTATGAAATGTAGGCTTCAGTGCAAAAAGATTCTCTTGGTGCTTGATGACGTGGACAACTTTATAATAGTAGAAGATTTAACTAAAGTGTGTGACTGGTTTGGGGAAGGAAGTAAAATTATAATCACATCAAGAGACAAACAAGTGTTAAAGAACGCTTCTACATTTACATTGTATCATGTTCATGAATTGAATTTTTTTGAAGCCCTTCATCTCTTTAGTTTGAAAGCGTTTAAGCAAAAGGTGCCATATAAGAGCTATAAGGGGTTGTCAAAATGGATATTGGGCTATTGTCAAGGAAACCCATTAGCCCTAATAGTGTTGGGTAGCTTTCTTCATGGTAGAGGAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAATTAAAACAGTATTTACAAAAGGACATTTTTAATGTGTTAAAATTGAGTTTTGATGGACTTGATGACCAGCAAAGGAATATATTTCTTGATCTAGCATTCTTGGTTAGAGAAACATATTGTCTTTCTTTGGACTCTATAAGTAACTTCTATGAATCTTCAGCTTATATTGAGATAAGTGTTCTCAAAGACAAGTGCCTCATTTCAGTTGACGAAATTGGTTACATTAAGATGCATGATCTTGTGATGAAAATGGGCCTTGAAATTTGTAGACAACAACTAATCCTTGATCCACAAAGGCCCGTTCGACTATGGAGACGTGAGGATATTTATCAAGTTTTTAATAATAAAGAGTATTTTCCAAATTTACATTCAATTGATCTACAAGGCTCCAAGCATCTTATAGAACTCCCAAATCTCTCTCAAACCCCAAATATTCAAGTAGTAAATCTTATTCACTGTGTAAATTTGGCTCAAATTCATTCTTCAATTGTCCTGCCCAAGCTTGAGGTTATTTACACAATTGGTTGCAACAAGCTAAGGCATGTAGAAGTTGGTGGCAAAATTAAAAGGAGAAGTTCAGAGATTGTGGTTGTCCTCCAATTTTTGGATCTTGAAAACTTCTCATTCAAGAAAGCTACTGTGAAGGCCTTTGCATCTAATGATGATAATATTTTATCTAGTTTTCGGATTAAAGTCATGAGTGTAGCATTCAGAGAGATATTAGAGTGCATGGATAGTATGGAGAGTGTAAAGTTTAAATTGTTGACCCAAAATTTAGCATCATTACTTCCATTTGTTAGTATATTTGGTTGGTTAGATACTCCATTTGAGTTTGGGAATTTCGAGAAAAACTTTCATTGTTATCCTTTTCATGGTAAACGGAACACTGGATCGTCGATATGGACGCACACTGGACTGGAAGTGGCGAAGAGAAAAGCAAGTGACGCTATTTGGCAAGAGATACATGCAAGTACAACAACTTCAAAATTAGAGAACAATGAAGTTATTGGGAGAGCAACTTGGAGCATTCTTGGTCTTTCAGTTCTGAAATCACTTGCAGAAATTGCTTGCACAAGGCTACAACCTGCCATAGATTTTACCTTCTCACGGGATACAGCAGAAACAAAAGGGGGTAACGGACGATCTGCTATCATCCATCAGTATCCGGGAATATGTGGTTTCTTATTGCAGCCTGAATCTCTCACTATTGATATTCATTTTCCGGCTTTCAAAAGAAGAAAGTGGTGGTGA 2250 0.3613 MDAIDAIMLISTIAVYKVIRFFSSLVHIFHPVAVDCYNDDVVSTSTISSSSHDISVPPPATKFKHKEKVQMWKDAMTRSTSLSGWDSKNIRPDSKLIKMIVNDIRNKLNYLSSCHFDGLIGINHHIEKIEELLYEGRIVGIWGMAGIGKTTLAKVIFHKLKAQFESFSFVENVREKLAKIGLDNLQEECLKELLKEDDNDVYHMKFTSMKCRLQCKKILLVLDDVDNFIIVEDLTKVCDWFGEGSKIIITSRDKQVLKNASTFTLYHVHELNFFEALHLFSLKAFKQKVPYKSYKGLSKWILGYCQGNPLALIVLGSFLHGRGKEEWESALEKLKQYLQKDIFNVLKLSFDGLDDQQRNIFLDLAFLVRETYCLSLDSISNFYESSAYIEISVLKDKCLISVDEIGYIKMHDLVMKMGLEICRQQLILDPQRPVRLWRREDIYQVFNNKEYFPNLHSIDLQGSKHLIELPNLSQTPNIQVVNLIHCVNLAQIHSSIVLPKLEVIYTIGCNKLRHVEVGGKIKRRSSEIVVVLQFLDLENFSFKKATVKAFASNDDNILSSFRIKVMSVAFREILECMDSMESVKFKLLTQNLASLLPFVSIFGWLDTPFEFGNFEKNFHCYPFHGKRNTGSSIWTHTGLEVAKRKASDAIWQEIHASTTTSKLENNEVIGRATWSILGLSVLKSLAEIACTRLQPAIDFTFSRDTAETKGGNGRSAIIHQYPGICGFLLQPESLTIDIHFPAFKRRKWW 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1294 749 Gene3D - 22 113 IPR035897 -
Dere10g1294 749 SUPERFAMILY L domain-like 449 543 - -
Dere10g1294 749 SUPERFAMILY "Winged helix" DNA-binding domain 341 446 IPR036390 -
Dere10g1294 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 364 IPR027417 -
Dere10g1294 749 PRINTS Disease resistance protein signature 138 153 - -
Dere10g1294 749 PRINTS Disease resistance protein signature 450 466 - -
Dere10g1294 749 PRINTS Disease resistance protein signature 305 319 - -
Dere10g1294 749 PRINTS Disease resistance protein signature 212 226 - -
Dere10g1294 749 Gene3D - 114 264 IPR027417 -
Dere10g1294 749 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 445 IPR044974 GO:0006952
Dere10g1294 749 Gene3D - 271 354 IPR042197 -
Dere10g1294 749 Pfam NB-ARC domain 124 340 IPR002182 GO:0043531
Dere10g1294 749 Gene3D Ribonuclease Inhibitor 439 593 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1294 Dere-ChrDere10 24146197 24150814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1294 120 454 WRKY Transcription Factor Family AT5G45050 34.884 1.05e-44 171