Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1292 ATGAAGTTATCTGAATCAATATTGGGTTATTGTGAAGTTAACCCCTTAGCCCTTACAGTGTTGGGTTACTTTCTTTATGATAGAGAAAAAGAAGAGTGGGAAAGCACTTTGGAAAAACTAGAGCAAGCTACAAATAAGGACATTTTTAATGTATTAAAATTGAGTTTTGATGGACTTGATGACCAGCAGAAGAATATATTTCTTGACTTAACAGTCTTGTTTAGAAGAATTTATCTTTCTTTGAGCTTTATAAGAAACTTCTATGACTCTTCAGCTTATATTGACATAAGTGTTCTCAAAGACAAGTGCCTCGTTTTAGTTGGTAAAACTGGTGGTATTAAGATGCATCATCTAGTGAGAAAAATAGGACTTGAAATTTCTAGACAGCAATTAATCCTTATCCCTCAAAGACCCGTTCGACTATGGAGACACGAGGATATTTATCAAGTTTTCAATAATAATGAGAGAATCAAGTGGAACTTTACATTTCCTAATAGTCATATTCGACAACTTTGGGATGGAAATCAGCATTTTATAGAACTCCCAGATCTCTCTCAAGCCCCAAATATTGAATACGTAAATCTTGATTATGGTGTAAATTTGGCTCAAATACATTCTTCAATTGTCTTGCGCAAGCTTAGCTATTTTTCCATAAATAATTGCGACAAGGTAAGGCATGTAAAAGTTGGAGGCAAAATTAAAAGGGGAAATTCAGGAATTTTGGTTGTCAGCCAATTTTGGGATCTTGAAAACTTCTCATTCTATAAAGTGACTGTGAAGGCCTTCACATCTGACGATGATAATATTTCACCTAGTATCCAGATTAAAGTCATGATAGTAACATTTACAGAGATATTAGAGTGCATAGATAGTATCGAGAGAGCAAAGCTTAAATTGTTGACCCAAAGTTTGGCATCTTTACTTCCATTTGTTAGTATACTTGGTTGGTTTGATACTCCATTAGGGTTTGGGAATTTCAAGAAAAGCCTTGTTTGTTATTCTACCTATTATGAATGGACCATTCGTGGACCAATGATATTGATGATCACTGGACTGTTAGTGGAGAAGAGAGAAGCAAGTGACGCCATTTGGCCGGTGATAAATGCAAGTACAACAAGAAGAAAATCAGAGGTTACCGACTATACTTCTGATCATAAAGAAGTTAGGGAAGTGAAAGAAATGGTAGTGGAGACGAGAAAATGGGCAAACAAAGAAGAAAGGATTCCACTGGAGCTTGAAGAGGAGTTAATGACTGAAAACAATGAAGTTATTGGGAGAGCAACTTGGAGCATTCTTGACCTGTCAGTTCTGAAATCACTTGCAGAAATTGCTTGCACAAGGCTTCAACCTGCCATAGATTTTACCTTCTCACTGGATGCAGCAGAAACTGAAGGGGATAACAAAAGTTGCTCTTTCGCCCATAGTAGATATCTGGGAAGCGATAAATTTTTATTGCTCACTGAAGCTAACTTCTTCACTTTTATTCTCCAGCTTACAAAAGAAGAAAGTGATGTCTAA 1518 0.3617 MKLSESILGYCEVNPLALTVLGYFLYDREKEEWESTLEKLEQATNKDIFNVLKLSFDGLDDQQKNIFLDLTVLFRRIYLSLSFIRNFYDSSAYIDISVLKDKCLVLVGKTGGIKMHHLVRKIGLEISRQQLILIPQRPVRLWRHEDIYQVFNNNERIKWNFTFPNSHIRQLWDGNQHFIELPDLSQAPNIEYVNLDYGVNLAQIHSSIVLRKLSYFSINNCDKVRHVKVGGKIKRGNSGILVVSQFWDLENFSFYKVTVKAFTSDDDNISPSIQIKVMIVTFTEILECIDSIERAKLKLLTQSLASLLPFVSILGWFDTPLGFGNFKKSLVCYSTYYEWTIRGPMILMITGLLVEKREASDAIWPVINASTTRRKSEVTDYTSDHKEVREVKEMVVETRKWANKEERIPLELEEELMTENNEVIGRATWSILDLSVLKSLAEIACTRLQPAIDFTFSLDAAETEGDNKSCSFAHSRYLGSDKFLLLTEANFFTFILQLTKEESDV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1292 505 SUPERFAMILY L domain-like 120 224 - -
Dere10g1292 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 70 IPR027417 -
Dere10g1292 505 Coils Coil 23 46 - -
Dere10g1292 505 Gene3D - 1 60 IPR042197 -
Dere10g1292 505 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 414 IPR044974 GO:0006952
Dere10g1292 505 SUPERFAMILY "Winged helix" DNA-binding domain 47 151 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1292 Dere-ChrDere10 24091518 24094886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1292 2 207 WRKY Transcription Factor Family AT5G45050 26.047 2.67e-10 61.2