Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1291 ATGGATGCAATCGAAGCTATAATGCTCATATCAACAATTGCAGTTTATAAAGCTATCAGACTCTTTTCTTCTTTAGTCCATATTTTCCACCCTGTCGCTGTTGATTGTTATAACGATGATGTCGTTTCAACTTCAACGATTTCTAGTTCTTCCCATGACATTAGTGTTCCTCCTCCTGCTACCAAGCCTGACTCCAAGTTGATTAAAATGATTGTCAAAGACATTTGGAACAAGTTGAATCACTTGTCATCATGTCATTTTGACGGGTTAATTGGCATTAATCATCATATTGAGAAAATTGAAGAATTACTATATGAGGGTCGCATTGTTGGAATATGGGGAATGGCTGGCATTGGGAAGACCACACTTGCTAAAGTTATATTTCACAAGTTAAAAGCACAATTTGAGTCATTCTCCTTTGTTGAAAATGTGAGAGAAAAACTCGCAAAAATTGGATTGGATAACTTACAGGAAGAATGTCTCAAAGAATTATTGAAAGAGGATGACAATGATGTCTACCACATGAAATTCACATCTATGAAATGTAGGCTTCAGCGCAAAAAGATTCTCTTGGTGCTTGATGACGTGGACAACTTTATAATAGTAGAAGATTTAACCAAAGTGTGTGACTGTTTGAAAGCGTTTAAGCAAAAGGTGCCATATAAGAGCTATAAGGGGTTGTCAAAATGGATATTGGGCTATTGTCAAGGTAACCCATTAGCCCTAATAGTGTTGGGTAGCTTTCTTCATGGTAGAGGAAAAGAAGAGTGGGAAAGTACTTTGGAAAAACTAAAATAG 798 0.3659 MDAIEAIMLISTIAVYKAIRLFSSLVHIFHPVAVDCYNDDVVSTSTISSSSHDISVPPPATKPDSKLIKMIVKDIWNKLNHLSSCHFDGLIGINHHIEKIEELLYEGRIVGIWGMAGIGKTTLAKVIFHKLKAQFESFSFVENVREKLAKIGLDNLQEECLKELLKEDDNDVYHMKFTSMKCRLQRKKILLVLDDVDNFIIVEDLTKVCDCLKAFKQKVPYKSYKGLSKWILGYCQGNPLALIVLGSFLHGRGKEEWESTLEKLK 265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1291 265 Pfam NB-ARC domain 95 218 IPR002182 GO:0043531
Dere10g1291 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 264 IPR027417 -
Dere10g1291 265 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 265 IPR044974 GO:0006952
Dere10g1291 265 PRINTS Disease resistance protein signature 109 124 - -
Dere10g1291 265 PRINTS Disease resistance protein signature 183 197 - -
Dere10g1291 265 Gene3D - 83 220 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere10g1291 Dere-ChrDere10 24079431 24081092 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1291 62 203 WRKY Transcription Factor Family AT4G12020 35.135 5.65e-18 81.6