Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1290 ATGGAAGCAAACGAAGTTATAATGCTCATATCAACAATTGCAGTTTATAAAGCTATCAGATTCATTTCTTCTTCACTCCATATTTTCCATCCTGTCGCTGTTGATCGTTATAATGATGATGTCGTTTCAACTTCAACGGTTTCTAGTTCTTCCCATGATATTAGTGTTCCTCCTCCTGCTACCAAGCCTGACTCTGAATTGATTAAAAAGATTGTCAAAGACATTTGGGACAAGTTGAATCACTTGTCATCATGTCATTTTGATGGGTTAATTGGCATTGGTCGTCGTATTGAGAAAATTGCAGAATTACTATATGAGAATCGCATTGTTGGAGTATGGGGAATGGGTGGTATAGGGAAGACCACACATGCTAAAGTTGTATTTCACAAGTTAAAAGCACAATTTGAATCATTCTCCTTTGTTGAAAATGTGAGAGAAAAACTCGTAAAAATTGGATTGGATAACTTACTGGAAGAATGTCTCAAAGAATTATTGAAAGAGGACGACAATGATGTCTACCACATGAAATTCACTTCTATGAAATTTAGGCTTCAACACAAAAAGATTCTCTTGGTGCTTGATGACGTGGACAACTTTATAATAGTAGAAGATTTAACCAAAGTGTGTGACTGGTTTGGGGAAGGAAGTAGAATTATAATCACATCAAGAGACAAACAAGTGTTAAAGAACGCTTCTGCATCTACATTATATCATGTTCGTGAATTGAATTTTTCTGAAGCCCTTCATCTCTTCAGTTTGAAAGCGTTTAAGCAAAAAGTGCCACATGAGAGCTATATGGAGTTGTCAAAATGGATATTGGGCCATTGTGAAGGCAACCCATTAGCCTTAAGAGTGTTGGGTAGCTTTCTTCATGGTAGAGGAAAAGAAGAGTGGGAAAGTACTTTGGAAAAACTAAAACAGTATCCACAAAAGGACATTTTTAATGTGTTAAAATTGAGTTTTGATGGACTTGATGACCAGCAAAGGAATATATTTCTTGATCTAGCATTCTTGGTTAAAGAAACATATTGTCTTTCTTTGGACTTTATAAGAAACTTCTATGAATCTTCAGCTTATATTGAGATAAGTGTTCTCAATGACAAGTGCCTCATTTCAATTGATGAAATTGGTGATATTAAGATGCATGATCTTGTGATGAAAATGGGCCTTGAAATTTCTAGACAACAATTAATCCTTCATCCTCAAAGGCCCGTTCGACTATGGAGACATGAGGATATTTATCAAGTTTTTAATAATAAAGAGCATTTTCCAAATTTACACTTAATTGATCTAGGGGACTCCAAGCATCTCATAGAACTCCCAAATCTCTCTCAAACCCCAAATATTCAAGAAATAAATCTTTGTCGCTGTGTAAATTTGGCTCAAATTCATTCTTCAATTGGCCTGCCCAAGCTTTGTGATATTTTAACATTGGGTTGCACCAAGCTAAGGCATGTGGAAATTGGTGGCAAAATTAAAAGGAGAAGTTCAGGGATTGTGGTTGTCCGCCAATTTTTGGATCTTGAAAACTTCGCATTCAACAAAGTTACTGTGAAGGCCTTTGCATCTAATGATGATAATATTTTACGTAGTTTTCAGATTAAAGTCATGAGTGTAGCATTCAGAGAGATATTAGAGTGCATGGATAGTATAGGGAGTGTAAAGTTTAAATTGTTGACCCAAAATTTAGCATCTTTGCTGCCATTTGTTAGTATATTTGGTTGGTTAGATACTCCATTTGAGTTTGGGAATTTCGAGAAAAACTTTCATTGGTCTTCTTTCCATGGTGAACGGAGCACTCGTCCATCGATATTGACGAACACTGGACTGGACGTGACGAAGAGAAATGCAAGTGACGCCATTTGGCAAGAGATAAATGCAAGTACAACAAGTTCAAAATTAGAGGTTACCGACTATATGTCTGATCATAAAGTGGTTAGGGAAGTAAAAGAAATGGTAGTGGAGACGAGAACATGGGAAAACAGAGAAAAAAGGATGCCATTGGAGCTTGAAGAAGAGTTAATAACAGAAGCGGAGTGTTGTGGAAACAGCGATAATACAATAACAAGAGCTCCCTATATCATTACTCGCTGGTCATTATTAACAGAAGTGATGTTACAGGAAAATGAAGTTATTGGGAGAGCAACTTGGAGCATCCTTGACCTTTCAGTTCTAAAATCACTTGCAGAAATTGCTCGCACAAGGCTTCAACCTGCCATAGATTTTACCTTCTCACGGGATATAGCAGAAACGAAAGGGGGTAACGGACAATCTTTTATCGGCTACCGTCAAGAATATCTGAAAATGTTCATTTTCTTATGGCAATGGAGATATTTCGCATTTGATATTGAATTTTCGGCCTACAAAATAAGAAAGTGGTGGTGA 2385 0.3669 MEANEVIMLISTIAVYKAIRFISSSLHIFHPVAVDRYNDDVVSTSTVSSSSHDISVPPPATKPDSELIKKIVKDIWDKLNHLSSCHFDGLIGIGRRIEKIAELLYENRIVGVWGMGGIGKTTHAKVVFHKLKAQFESFSFVENVREKLVKIGLDNLLEECLKELLKEDDNDVYHMKFTSMKFRLQHKKILLVLDDVDNFIIVEDLTKVCDWFGEGSRIIITSRDKQVLKNASASTLYHVRELNFSEALHLFSLKAFKQKVPHESYMELSKWILGHCEGNPLALRVLGSFLHGRGKEEWESTLEKLKQYPQKDIFNVLKLSFDGLDDQQRNIFLDLAFLVKETYCLSLDFIRNFYESSAYIEISVLNDKCLISIDEIGDIKMHDLVMKMGLEISRQQLILHPQRPVRLWRHEDIYQVFNNKEHFPNLHLIDLGDSKHLIELPNLSQTPNIQEINLCRCVNLAQIHSSIGLPKLCDILTLGCTKLRHVEIGGKIKRRSSGIVVVRQFLDLENFAFNKVTVKAFASNDDNILRSFQIKVMSVAFREILECMDSIGSVKFKLLTQNLASLLPFVSIFGWLDTPFEFGNFEKNFHWSSFHGERSTRPSILTNTGLDVTKRNASDAIWQEINASTTSSKLEVTDYMSDHKVVREVKEMVVETRTWENREKRMPLELEEELITEAECCGNSDNTITRAPYIITRWSLLTEVMLQENEVIGRATWSILDLSVLKSLAEIARTRLQPAIDFTFSRDIAETKGGNGQSFIGYRQEYLKMFIFLWQWRYFAFDIEFSAYKIRKWW 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1290 794 Pfam NB-ARC domain 97 313 IPR002182 GO:0043531
Dere10g1290 794 Gene3D - 70 236 IPR027417 -
Dere10g1290 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 335 IPR027417 -
Dere10g1290 794 PRINTS Disease resistance protein signature 421 437 - -
Dere10g1290 794 PRINTS Disease resistance protein signature 109 124 - -
Dere10g1290 794 PRINTS Disease resistance protein signature 276 290 - -
Dere10g1290 794 PRINTS Disease resistance protein signature 183 197 - -
Dere10g1290 794 Gene3D - 241 325 IPR042197 -
Dere10g1290 794 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 417 IPR044974 GO:0006952
Dere10g1290 794 SUPERFAMILY L domain-like 418 711 - -
Dere10g1290 794 SUPERFAMILY "Winged helix" DNA-binding domain 312 417 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1290 Dere-ChrDere10 24064904 24069482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1290 91 425 WRKY Transcription Factor Family AT5G45050 34.012 2.49e-47 180