Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1289 ATGGATGAAAACAAAGCTATAATGCTCATATCAACAATTGCAGTTTATAAAGCTATCAGATTAATTTCTTCTTCACTCCATATTTTCCATCCTGTTGCTGTTGATCGTTATAATGATGATGTCGTTTCAACTTCAACGGTTTCTAGTTCTTCCCATGATATTAGTGTTCCTCCTCCTGCTACCAAGTACACCAAGCCTGACTCCAAATTGATTAAAATGATTGTCAAAGACATTTGGAACAAGTTGAATCACTTGTCATCATGTCATTTTGATGGGTTAATTGGTATTGATCATCGTATTGAGAAAATTGAAGAATTACTATATGAGAATCGCATTGTCGGAATATGGGGAATGGGTGGTATAGGGATGACCACACTTGCTAAAGTTGTATTTCACAAGTTAAAAGCACAATTTGAATCATTCTCCTTTGTTGAAAATGTGAGAGAAAAACTCGCAAAAATTGGATTGGATAACTTACAGGAAGAATGTCTCAAAGAATTATTGAAAGAGGACGACAATGATGTCTACCACATTAAATTCACTTCTATGAAAAAATTGGATTTTCGTGACGCCCTCCATCTCTTCAGTTTGAAAGCGTTTAAGCAAAAGGTGCCATATAAGAGCCATATGAAGTTATCAGAATTAATATTGGGTTACTGTGAAGGAGAAGTTCAGGGTTTGGTGGCTCTTAAAAACTTCTCGTTCAATAAAGTGACTGTGAAGGTCTTTGCATCTAATGATGATAATATTTCATCTAGTTTTCGGGTTAAAATCATGACTGCAGCATTCAGAGAGATATTAGAGTGTATGGATCGCATGGAGAGTGTAAAGTTTAAATTGTTGACCCAAAATTTAGCATCTTTACTTCCATTTGTTAGTATATTTGGTTGGTTAGATACTCCATTTGAGTTTGGGAATTTCGAGAAAAACTTTCATTGTTATTCTATCCATGATGAACGGGACATTGGACTGATAGTGGAGAAGAGAAAAGCAAGTGACGCCATTTGGCAAGAGATAAAGGCAAGTACAACAACTTCAAAATTGGAGGTTACCGACTGTATTTCTGATCATAAAGTGGTTAGGGAAGTAAAAGAAATGGCAGTGGAGACGAGAACATGGGAAAACAGAGAAAAAAGGATGCCATTGGAGCTTGAAGAAGAGTTAATAACAGAAGCAGAATGTTGTGGAAACAGCGATAATACATTAACAAGAGCTCCCTATATCATTACTCGCTGGTCATTATTAACACAAGTGTTGTTACAGAAAAATGAAGTTATTGGGAGAGCAACTTGGAGCATTCTTGACCTTTCAGTTCTGAAATCACTTGCAGAAATTGCTCGCACAAGGCTTCAACCTGCCATAGATTGGACCGTCTTGCGGGATACAGCAGAAACAAAAGCTGGTCATATGCATGAGGGAAGATTTCATTTCTTATTGTGCTGTGAACCTGTCGAACTTCGGATTCATTTTTATCGCCTGCTCCGTGCTTGTAAAAATTTATATGGGTAA 1509 0.3685 MDENKAIMLISTIAVYKAIRLISSSLHIFHPVAVDRYNDDVVSTSTVSSSSHDISVPPPATKYTKPDSKLIKMIVKDIWNKLNHLSSCHFDGLIGIDHRIEKIEELLYENRIVGIWGMGGIGMTTLAKVVFHKLKAQFESFSFVENVREKLAKIGLDNLQEECLKELLKEDDNDVYHIKFTSMKKLDFRDALHLFSLKAFKQKVPYKSHMKLSELILGYCEGEVQGLVALKNFSFNKVTVKVFASNDDNISSSFRVKIMTAAFREILECMDRMESVKFKLLTQNLASLLPFVSIFGWLDTPFEFGNFEKNFHCYSIHDERDIGLIVEKRKASDAIWQEIKASTTTSKLEVTDCISDHKVVREVKEMAVETRTWENREKRMPLELEEELITEAECCGNSDNTLTRAPYIITRWSLLTQVLLQKNEVIGRATWSILDLSVLKSLAEIARTRLQPAIDWTVLRDTAETKAGHMHEGRFHFLLCCEPVELRIHFYRLLRACKNLYG 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1289 502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 176 IPR044974 GO:0006952
Dere10g1289 502 Pfam NB-ARC domain 100 171 IPR002182 GO:0043531
Dere10g1289 502 Gene3D - 89 200 IPR027417 -
Dere10g1289 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1289 Dere-ChrDere10 24048581 24053352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1289 53 169 WRKY Transcription Factor Family AT4G12020 33.884 6.48e-10 60.1