Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1288 ATGGATGCAAACAAAGCCATAATACTCATATCAACAATAGCAATTTATAAAGCTATCAGATTCATTTCTTCTTCACTCCATACATCCCATCCTGTTGTTGTTGATAGTTGTGACAATGATGACATTCCAAATTCAACGGTTTCTAATTCTTCCCATGATATTAGTGTTGCACCTCCTGCTTCCAAATTTGAACACAACAAGGAGAAAATGCAAATGTGGAAGGATGCTATGATCCAGTCTACAAGTCTCTCTGGATGGGATTCAAAGAATATTAGGCCTGAATCCAAACTAATTAAAATGATTGTCAAAGACATTTGGAACAAGTTGAATAAGTTGTCATCAAGTCATTTTGATGGGTTAGTCGGCATTGATCATCATATTGAAAAAATTGAAGAATTACTATTTGAGAGTCGCATTATTGGAATATGGGGCATGGGTGGTATAGGGAAGACCACACTTGCTAAAGTTATATTTCACAAGTTGAAAGCACAATTTGAATCATTCTCCTTTATTGAAAGTGTGAGAGAAAAAGTAGCAAAAATTGGATTGGACAAGTTACATGAAGAATGTCTTAAAGAATTATTACAAGACAATGACATTGATGTCTGTGACATGAAATTCACTTCCATGAAAAGTAGGCTTCAACACAAAAAGATTTTTCTAGTGCTTGATGATGTGGACAACTTAATAAGTGTTGAAGATTTGACCAAAGTGTGTGATTGGTTTGGGGACGATAGTAGGATTATTATCACATCAAGAGACAAACAAGTGCTCAAGAATGCTTTTGCATCTACATTGTATCATGTTCAAGAATTGGATATTCCTAACGCCATTCATCTCTTCAGTTTGAAAGCATTTAAGCAAAAAGTGCCATATAAGAGCTATATGGAGTTATCAAATTGGATATTGGGTTATTGTGAAGGTAACCCATTAGCCCTTATAGTGTTGGGTTGCTTTCTTTATGGTAGAGGTAAAGAAGAGTGGGAAAGCACTCTGGAAAAACTAAATAAAGCTCCACATAAGGACATTTTTAATGTGTTAAAATTGAGTTTTGATGGACTTGATGACCTACAAAAGAATATATTTCTTGACTTGGCATACTTGTCTAGAGAAACATTTTGTCTTTCTTTGGACTTTATAAGAAACTTCTATGGCTCTTCCGCATATATTGAGATAAGTGTTCTCAAAGACAAGTGCCTCATTTCTGTTAACGAAATTGATGGTATTAAGATGCATAATCTTGTAAGGAGAATGGGTTTTGAAATTTGTAGACAACAATTAATCCTTGACCCTCAAAAACCCGTTCGACTATGGAGGCATGAGGATATTTATCAAATTTTCAACAATAATGAGGGGACTGAGACTATTCAATACATATCTTTGGACACATGCAAGACAAAAAGGATTATATTAATGGCTAAGAATCTAGTGAAATTTTCCATGCCTAATAGTCATCTTCGACAACTTTGGGATGGAAATCAATGTTTTCCAAATTTACAGTCAATTAATCTTAGTGGCTCAAAACATCTCATAGAACTCCCAAATCTCTCTCAAGCCCCAAATATTCAAGAGATACTTCTTAATGGCTGTGTAAATTTGGCTCAAATTCATTCTTCAAATGTCTTGTGCAAGCTTTGGAATTTGCAAATTTATGGTTGCGAAAAGCTGAGGCATGTAAAAGTTGGTGGCAAAATTAAAGGTAGAAGGTCAAGGTTTGTGGTTGTCTACAAAATTTTGGATCTTAAGAACTTCTCGTGCAAAAAAGTGAATGTGAAACTCTTTGTTACAAACAATGACAATATTTTCTCTGGTTTTCGGATTAAAGTTATGTCAATATCTTTCACAGAGATATTAGAGTGCATGGATAGTATGGAGAGTGCAAAGTTTAAATTGTTGACCCAAAGTTTAGCTTCTTTACTTCCATTTGTTAGTAGACTTCATTGGACAGATACTCGATATACATTTAGGAATTCCAAGAAACATTTTGACTATTATTTTTCCTATGATGAAAAGAACATGTATGAACAATTGAAAGTTATCAGCTCTGGACTGCTATTCAAGCCAAGAGAATCAAGTAATGCCCTTGAGCCACTTCAAAGAGCAAGGACAACAAGCAGAGAATTAGAGGTTAGGGTAGTTAAAGAAGTGGTAGTGGAGACGAGAAAGTGTACAAACAAAGAAGAAAGGAGGTCATTGGAGCTTGAGAAGAAGTTAATGACAAAAGTAAAATGCTATGGAAGCAGTGGTAATACATTAACAAGAATTCCCTACAGCATTGCCTGCTGGTCATTATTAACAAAATTGTCATTACAAAAAAGTGATATAATTGGGAGAGCAGCATGGAGCATTCCTGAGCTTTCAATTATGAAATCACTTGATGAAGCTGATTGCACAAGGTTTCAACTTGCCTTACATATTACCTTTGCAGAAACAGAAGTGGGTACCAAAAAACTTATGTTCTTCGGTATCCCAAATTTGGAACATGATCATTCATTCATACGCTTTAAAGGATCCAGATTTTTGTTTGGCTATTTGGCTCGTCAAGGAAGGAAGAGAGGGTGA 2562 0.3509 MDANKAIILISTIAIYKAIRFISSSLHTSHPVVVDSCDNDDIPNSTVSNSSHDISVAPPASKFEHNKEKMQMWKDAMIQSTSLSGWDSKNIRPESKLIKMIVKDIWNKLNKLSSSHFDGLVGIDHHIEKIEELLFESRIIGIWGMGGIGKTTLAKVIFHKLKAQFESFSFIESVREKVAKIGLDKLHEECLKELLQDNDIDVCDMKFTSMKSRLQHKKIFLVLDDVDNLISVEDLTKVCDWFGDDSRIIITSRDKQVLKNAFASTLYHVQELDIPNAIHLFSLKAFKQKVPYKSYMELSNWILGYCEGNPLALIVLGCFLYGRGKEEWESTLEKLNKAPHKDIFNVLKLSFDGLDDLQKNIFLDLAYLSRETFCLSLDFIRNFYGSSAYIEISVLKDKCLISVNEIDGIKMHNLVRRMGFEICRQQLILDPQKPVRLWRHEDIYQIFNNNEGTETIQYISLDTCKTKRIILMAKNLVKFSMPNSHLRQLWDGNQCFPNLQSINLSGSKHLIELPNLSQAPNIQEILLNGCVNLAQIHSSNVLCKLWNLQIYGCEKLRHVKVGGKIKGRRSRFVVVYKILDLKNFSCKKVNVKLFVTNNDNIFSGFRIKVMSISFTEILECMDSMESAKFKLLTQSLASLLPFVSRLHWTDTRYTFRNSKKHFDYYFSYDEKNMYEQLKVISSGLLFKPRESSNALEPLQRARTTSRELEVRVVKEVVVETRKCTNKEERRSLELEKKLMTKVKCYGSSGNTLTRIPYSIACWSLLTKLSLQKSDIIGRAAWSIPELSIMKSLDEADCTRFQLALHITFAETEVGTKKLMFFGIPNLEHDHSFIRFKGSRFLFGYLARQGRKRG 853
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1288 853 Gene3D Ribonuclease Inhibitor 435 809 IPR032675 -
Dere10g1288 853 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 65 652 IPR044974 GO:0006952
Dere10g1288 853 Gene3D - 272 355 IPR042197 -
Dere10g1288 853 SUPERFAMILY L domain-like 442 796 - -
Dere10g1288 853 PRINTS Disease resistance protein signature 139 154 - -
Dere10g1288 853 PRINTS Disease resistance protein signature 306 320 - -
Dere10g1288 853 PRINTS Disease resistance protein signature 213 227 - -
Dere10g1288 853 PRINTS Disease resistance protein signature 494 510 - -
Dere10g1288 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 365 IPR027417 -
Dere10g1288 853 Pfam NB-ARC domain 125 341 IPR002182 GO:0043531
Dere10g1288 853 Gene3D - 113 265 IPR027417 -
Dere10g1288 853 Pfam Leucine Rich Repeat 475 494 IPR011713 -
Dere10g1288 853 SUPERFAMILY "Winged helix" DNA-binding domain 342 446 IPR036390 -
Dere10g1288 853 Gene3D - 29 112 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere10g1288 Dere-ChrDere10 24034035 24038634 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1288 67 462 WRKY Transcription Factor Family AT4G12020 30.597 1.14e-46 179