Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1281 ATGGCTCTTTCCTCCCCATCTTTTGCCGGCAAGGCTGTGAAGCTCTCGCCCTCCGCCACTGAAACCGGCCGGATCTCCATGAGGAAAACTGCCACCAAGCCTACCTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCGTTCTCCGGCGAGCCTCCATCCTACTTGACTGGTGAGTTCCCGGGCGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTCGCTAGGAACCGCGAGCTCGAGGTCATCCACTGCAGATGGGCCATGCTCGGAGCTTTGGGCTGCGTCTTCCCTGAACTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCTGTATGGTTCAAGGCCGGAGCCCAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCACGCACAGAGCATTTTGGCCATATGGGCTTGCCAAGTGATCTTGATGGGTGCTGTGGAGGGATACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACCGACCCACTCTACCCTGGTGGAAGCTTTGACCCACTGGGCCTTGCTGACGACCCAGAGGCTTTTGCTGAGTTAAAGGTGAAGGAGATCAAGAACGGGAGATTGGCTATGTTCTCCATGTTTGGATTCTTTGTGCAAGCTATCGTGACCGGAAAGGGGCCTCTGGAGAACCTTGCAGACCACATTGCTGATCCAGTGAACAACAATGCTTGGGCCTATGCCACAAACTTTGTCCCTGGCAAGTGA 774 0.5685 MALSSPSFAGKAVKLSPSATETGRISMRKTATKPTSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1281 257 Gene3D Chlorophyll a/b binding protein domain 48 250 - -
Dere10g1281 257 SUPERFAMILY Chlorophyll a-b binding protein 40 254 - -
Dere10g1281 257 FunFam Chlorophyll a-b binding protein, chloroplastic 48 250 - -
Dere10g1281 257 Pfam Chlorophyll A-B binding protein 57 223 IPR022796 -
Dere10g1281 257 MobiDBLite consensus disorder prediction 19 38 - -
Dere10g1281 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 257 IPR001344 GO:0009765|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere10g1281 Dere-ChrDere10 23953343 23954116 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1281 1 257 Chloroplast and Mitochondria Gene Families AT1G29930 88.168 5.96e-170 468