Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1278 ATGCCGGAAGCTGCGTGGAAATGCCCGGCCAAGCCCCGACACTTTAAGAACTACAAGCTGTCCAAGTCCTGCCAGTTCTGCAAGAAGAGTCGGAGGTACAGGACGGCTAATGCCTCTGTTGTCCATGACCACTTACTCCTGCCTCCTGGTGCACCACCGCCCTTTCGATCTTCCCACCTTTCCGAAGCTGCTACTTCTGTCTCTTTTACTACGAGTTTCGACGAATGGGAAAAAATGGAACGTATAGGGGGAGGCAGATTCGGGATTGTTTGTATTGCCCGCAACAGAGCAACGACAGAGTTATGTGCAGTGAAAGAAATGTTCGACACTGACGATTTACAAGTTGCGAAGTCCCTAGACCAGGAAATCCAAGTTCTTAGCAAACTGAAACACCCAAACATTGTAAAGTATTATGGCAGTAAGATAGTTGGAAACCAAGTTTCTTTATATATGGAATACGTCCAACCCGGGTCAATGAAGAAATACATTTCTGGACAAGGTGCTCTAGAAGAACCTTTAGTTCGACATTTTACTGCACAAATTCTGTCTGGCTTGGTTTACCTGCATAGCCAAAGAATAGTTCACAGGGACATCAAAGCGGATAACTTACTTATTTATTCTAACAACAATGTCAAGCTTGCTGACTTTGGTTTGGCTAAGCATGCAGCAAAAATAACAAGGCTTTTCTACGTTGTAGCTGGATTTATCTGTAGGCCATCACTCCGAGATGGAAACACCACATTGGACAGCTCCAGAGTCATTGAAATGCTCACAGGGAAGCTTCCATGGCATGGTCTTGAACCGGTATATAATTTTACACTTCGACATAAATCCATCTTGCCTTAG 846 0.4456 MPEAAWKCPAKPRHFKNYKLSKSCQFCKKSRRYRTANASVVHDHLLLPPGAPPPFRSSHLSEAATSVSFTTSFDEWEKMERIGGGRFGIVCIARNRATTELCAVKEMFDTDDLQVAKSLDQEIQVLSKLKHPNIVKYYGSKIVGNQVSLYMEYVQPGSMKKYISGQGALEEPLVRHFTAQILSGLVYLHSQRIVHRDIKADNLLIYSNNNVKLADFGLAKHAAKITRLFYVVAGFICRPSLRDGNTTLDSSRVIEMLTGKLPWHGLEPVYNFTLRHKSILP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1278 281 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 73 267 - -
Dere10g1278 281 Gene3D Transferase(Phosphotransferase) domain 1 72 280 - -
Dere10g1278 281 ProSiteProfiles Protein kinase domain profile. 76 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1278 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Dere10g1278 281 Pfam Protein kinase domain 77 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1278 281 SUPERFAMILY Protein kinase-like (PK-like) 58 271 IPR011009 -
Dere10g1278 281 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Dere10g1278 281 SMART serkin_6 76 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1278 Dere-ChrDere10 23884206 23888733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1278 75 267 MAP Kinase Kinase Kinase AT5G66850 43.192 2.52e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere10g1278 Pkinase 9.5e-41 CL0016