Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1272 ATGTCTGATGAACATAGAGAACTTCACTACCAAGGCAGATCCACCATGTTCTCTTCGTCGTCGTATGATTCGAAAGCTTTTGATCTTCCCTCCTACATGAGCTTGAGCGAGTGTCTGCAATTAGGAGCCGTGGACTACAATTCACTTGCAACTTCTCTTGGCTTCTCTCCTTCTTCAATATCAGAGGTGTTTTCATCTGCTGATCAAGGCAATACTCAAAAGCCACCGGACGATGGAATTTGCGGTGGCGGAGATGGCGGTGGCGGTGAAACTCCCATGACCCACAACTCGTCTCTCTCTTCCTCTTCTGCAGAAGCTGGGGTAGAGGAAGATTCAGGCAAGAACACTATGGATGACGATCATAGCCCAGTGAAAGGAGAAAAGGAGAGAGAAAGATCAGAAAAAGGGAAGAAAGGAAAGAAGAAAGAGAAGAAGAAGAAGGAGCCAAGGTTTGCGTTCATGACCAAGAGTGAGGTTGATCAGCTAGAAGATGGATACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAGAATAGCCCTTATCCAAGGAGCTATTACAGATGCACGACACAGAAGTGCATAGTGAAGAAACGAGTGGAGAGGTCGTTTCAGGACCCAACCACTGTGATAACTACTTACGAAGGTCAACACAACCATCCTGTCCCCACATCGCTGAGAGGCCATTATAATGCCGCGCTTAATATGTTCACACCTTCTCCATCTTCTTCCTCCTCTCTTCTCTCTCCACTGCCAAACTTGACTTCTCAAGATTTGCTTCTTCTTCACAGTTACGGAGCCTCCAATAGCAGTTATAATTATTCGCAAAACTATGCTGATCATTCCTCCCCTCAATATCATCACCAGCTTCCTCCTCACCATGACTATGGCCTCCTGCAAGACGTAATCCCTTCTTCTATGTTCCTCAAACAAGAGCCGCGAGAATGA 945 0.4624 MSDEHRELHYQGRSTMFSSSSYDSKAFDLPSYMSLSECLQLGAVDYNSLATSLGFSPSSISEVFSSADQGNTQKPPDDGICGGGDGGGGETPMTHNSSLSSSSAEAGVEEDSGKNTMDDDHSPVKGEKERERSEKGKKGKKKEKKKKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCIVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGHYNAALNMFTPSPSSSSSLLSPLPNLTSQDLLLLHSYGASNSSYNYSQNYADHSSPQYHHQLPPHHDYGLLQDVIPSSMFLKQEPRE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1272 314 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 262 IPR044810 GO:0003700
Dere10g1272 314 FunFam WRKY transcription factor 57 148 222 - -
Dere10g1272 314 Gene3D WRKY domain 146 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g1272 314 MobiDBLite consensus disorder prediction 111 136 - -
Dere10g1272 314 MobiDBLite consensus disorder prediction 1 22 - -
Dere10g1272 314 MobiDBLite consensus disorder prediction 60 150 - -
Dere10g1272 314 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1272 314 MobiDBLite consensus disorder prediction 91 109 - -
Dere10g1272 314 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1272 314 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g1272 314 SUPERFAMILY WRKY DNA-binding domain 154 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1272 Dere-ChrDere10 23721569 23723420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1272 30 312 WRKY Transcription Factor Family AT4G18170 47.059 8.03e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere10g1272 WRKY 2.5e-25 CL0274