Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1246 ATGATATGGTCCGAATTTCTCGGCGGCGAAGCGAACCCTATTTCGCAAACTAGTAAAGCAAAAATGGCCGTCCCGCTTCTTTCGAAGAAGATCGTGAAGAAGAGGGTCAAGAAGTTCAAGAGGCCACAGAGCGACCGCAAGATCAGTGTTAAGGAAAACTGGCGCAGACCCAAGGGTATAGATTCTCGTGTCAGGAGAAAGTTCAAGGGATGCACTTTGATGCCAAACATTGGTTATGGTTCAGACAAGAAGACTAGGCATTATCTCCCAAATGGTTTCAAGAAATTTGTTGTGAACAATGTCAAAGAGCTGGAACTGCTCATGATGCACAACAGGACATACTGTGCGGAGATTGCTCACAATGTATCTACCAGGAAGAGAAAGGAGATAGTTGAGAGAGCTGCCCAACTTGATGTTGTTGTAACGAACAAAACAGCCAGACTACGCAGCCAGGAGGATGAATAG 465 0.4559 MIWSEFLGGEANPISQTSKAKMAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1246 154 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 22 154 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere10g1246 154 SMART Ribosomal_L32e_2 36 143 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere10g1246 154 CDD Ribosomal_L32_L32e 43 143 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere10g1246 154 Pfam Ribosomal protein L32 37 143 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere10g1246 154 SUPERFAMILY Ribosomal protein L32e 18 152 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1246 Dere-ChrDere10 23446392 23449988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1246 22 154 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 2.59e-85 244