Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1239 ATGGTGGTAGAAGATACACCAAAGTCGGCTATTACTGACGATCAGATCAGTAACAGTGGCACAAACCCTAACCCTAGGGTCCGTGACTCCGACGAGGATGAGCTCGAGGAGGGAGAGATCGTCGGCGAAGATGAATCCGCTACTTCGAAGTCATCTTCCGCTGTTGTACGTCAGCCTCATCCACTTGAGAATTCTTGGACCTTTTGGTTCGATAACCCCTCAAACAAGTCCAAGCAAGTCCCATGGGGAAGTTCTATCCGACCCATCTATACCTTTGCAACTGTGGAGGAGTTTTGGAGCATTTTCAACAACATACATCACCCAAGCAAGCTTGCTGTGGGAGCAGACTTCCATTGTTTCAAAGATAAAATTGAGCCAAAATGGGAGGATCCCATTTGTGCCAATGGGGGAAAATGGACTGTCACGTTTCCTAGGGGGAAATCTGATACCTGTTGGTTATATACGTTGCTGGCAATGATTGGAGAACAATTTGATCATGGAGATGAAATTTGTGGAGCAGTAGTAAATGTCAGAGCTAGGCAAGATAAAATTTCTATTTGGACTAAGAACGCTTCAAATGAAGCAGCTCAGCTAAGCATTGGAAAACAGTGGAAGGAATTCATTGATTATTATGAAACCATTGGCTTTATATTTCATGAGGATGCTAAGAGGCTTGACAAAGCTGCCAAAAATAGATACACCATTTGA 708 0.4379 MVVEDTPKSAITDDQISNSGTNPNPRVRDSDEDELEEGEIVGEDESATSKSSSAVVRQPHPLENSWTFWFDNPSNKSKQVPWGSSIRPIYTFATVEEFWSIFNNIHHPSKLAVGADFHCFKDKIEPKWEDPICANGGKWTVTFPRGKSDTCWLYTLLAMIGEQFDHGDEICGAVVNVRARQDKISIWTKNASNEAAQLSIGKQWKEFIDYYETIGFIFHEDAKRLDKAAKNRYTI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1239 235 FunFam Eukaryotic translation initiation factor 4E 51 235 - -
Dere10g1239 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 222 IPR001040 GO:0003723|GO:0003743|GO:0006413
Dere10g1239 235 MobiDBLite consensus disorder prediction 1 58 - -
Dere10g1239 235 SUPERFAMILY eIF4e-like 43 231 IPR023398 -
Dere10g1239 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Dere10g1239 235 Pfam Eukaryotic initiation factor 4E 61 212 IPR001040 GO:0003723|GO:0003743|GO:0006413
Dere10g1239 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Dere10g1239 235 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1239 Dere-ChrDere10 23352221 23355230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1239 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 67.521 1.27e-115 328