Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1188 ATGATGAAGTGGGGTAGAAGGAAATCCTCTTCAGCTTCTTCTTCATCTAAACCATCTTTTATCTCTCACGTGTCTCCCCTTTCATGGCTGTCCAAGTTTAAGAAGATGAGAATCAGTACGGAGCCAGATCCTGTACGATTGAAGCAAAAGGGAGTACAAAATTGTCCATTGGTTACCTCACCACAGAATAGTTGTGGGAATGGTGGAAGGTTTTATGGGGGGGATGATGAAGCTTTTTGGAGACTTTCGTTTGGTGAAGAGTGTCATGAGAACAAGAAAGGCAGAGATACCCTGAAATCAGTAGTCCACAATTTGGATAATGGCGATAGATGGAATGCTGAGAAAAGGGAAAGAAGAGAAGGGACTTCAAAGCTCAGGGAGAACGAAAGGGAGTTAGGGGATGAAAGAAAATTGCTAAATGATAAGAAGATTTCACTGGAGATGGATGAGAATAATCGAGAAAAGGAATTTCAAAACTTAAGGGGGAGATTTGAGAGGAAAGCTCAAAGAGTTTTGCAAGAGCAAGTCTTAAGATTAGAAAGAGAAGCAGAGGATGCATCAACTATATCAGTAGAAAAAGACGTGCTGCAATTTGAATCACCTAGAACCATTTGGACACCAAGAAGACATTCTTTGGCCCATTCAGTAGATTTTAAGAATTCTATCCATAGAGGTATGAAAGAAGATCATGCATGTAATAGTCAAAGCATTCAGAAACATGAGAGGCCGAACTTACTACTAACTAAGGAGTTGAAGACAAAGACTAAAAAGAAGAGTCAATCACTTCATGTGAGCAGAGAAATCCAAAGGTGGAAACCAAAGCACAGCCCCCATAGCCCCAAGGTCAGAGTTTTTTCTCCAAGGATGGTCTCCAAGGTCGAAATCAGCAAAATAAAGGCTATAGAGGACATTAGAAAAGCAAAACTAAAGATGAAGAAAGCAAAGGAGAAAATCATGGAAGAAACGCAAGGTGTAGATAGCTTTGCAGTGGTAAAGTGTTCACTGGACCCACAGCAAGACTTTAGAGACTCAATGGTTGAGATGATCAGTGAGAAACAGATCTGCCAGCCAGATGAAATGGAAGAGCTCTTGGCCTGTTATCTAAGTTTGAATTCTGATGAGTACCATGATCTCATCATCAAAGTATTCCGGCAGGTATGGTTCGACATGAAACTAGATAGCATGGGAGTTAAGTTAGGCAAGCAATGTTGCTATGACTGA 1221 0.4079 MMKWGRRKSSSASSSSKPSFISHVSPLSWLSKFKKMRISTEPDPVRLKQKGVQNCPLVTSPQNSCGNGGRFYGGDDEAFWRLSFGEECHENKKGRDTLKSVVHNLDNGDRWNAEKRERREGTSKLRENERELGDERKLLNDKKISLEMDENNREKEFQNLRGRFERKAQRVLQEQVLRLEREAEDASTISVEKDVLQFESPRTIWTPRRHSLAHSVDFKNSIHRGMKEDHACNSQSIQKHERPNLLLTKELKTKTKKKSQSLHVSREIQRWKPKHSPHSPKVRVFSPRMVSKVEISKIKAIEDIRKAKLKMKKAKEKIMEETQGVDSFAVVKCSLDPQQDFRDSMVEMISEKQICQPDEMEELLACYLSLNSDEYHDLIIKVFRQVWFDMKLDSMGVKLGKQCCYD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1188 406 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Dere10g1188 406 MobiDBLite consensus disorder prediction 1 22 - -
Dere10g1188 406 MobiDBLite consensus disorder prediction 254 274 - -
Dere10g1188 406 Coils Coil 297 324 - -
Dere10g1188 406 MobiDBLite consensus disorder prediction 7 22 - -
Dere10g1188 406 NCBIfam uncharacterized plant-specific domain TIGR01568 329 389 IPR006458 -
Dere10g1188 406 MobiDBLite consensus disorder prediction 254 282 - -
Dere10g1188 406 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Dere10g1188 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 234 390 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1188 Dere-ChrDere10 22342277 22343497 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere10g1188 Ovate 3e-25 No_clan