Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1161 ATGAAGAGCTGTGATGAATGGAAGCCTTTTATAGTAATGATAGCCATTGATTTTGCTTTCGCAACAGTGAATATTCTCCTCAAGAAATCCCTTCAGGAGGGAATGAACCATTTGGTTTTCATCACATACAGGTTGGCAACTTCTAGCATTTTCCTAGCACCAATCGGCTACTTTTGGGAAAGAAATGGCAGACCAAAGCTCACATTTCGAATTTTATGTTACCTCTTTTTCAGTGCCATTGTTGGGGCCTCAGTCACACAGTATTTCTTCCTCCTGGGAATCCAATACACCTCTGCCACCTTTGCTTGTGCCTTTGTCAACATGGTGCCTGTGATCACATTCATTATGGCATTGCCATTTGGGTTAGAGACATTGAACATAAAATGCAACAGTGGGAGAGCAAAGATACTAGGCACAGTGGTGTGCATTGGTGGAGCACTGATATTAACACTTTACAGAGGAAAGCCTTTGTTTAATTATTCTCACAACGATTCTGCAGCCCCAATATCTAAAACTTCTGCAGTAAAGTTGGCTCCACCTATAAATACAGAGAAATGGACCATTGGTGTAATAGCTTTGATCCTGGGAACCCTGTTTTGGTCATCATGGTTTCTTGTTCAATCAAAAATAGGCAAGAGATACCCGTGCCAGTATTCCAGCACAGCCATCATGACCTTCTTCGGGGCCATTCAATCTGCTATTCTTAGCTTAGCCACTGGAAGGAACTTGTCTATGTGGGTTCTAAAGGGAAAGATGCAGATCATCACTGTTGTGTATTCTGGGATGGTTGGATCAGGGTTGTGCTACGTGGGAATGTCATGGTGTGTGAAGAAAAGAGGTCCAGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATTATGGCAGCCATGATTGATATCCCTTTCTTACATGAGCAGCTCCATCTCGGAAGTGTTTTGGGATCGATATTGGTGATGATGGGATTGTACATGCTTCTATGGGGAAAGAACAAGGAAGTGCAGAATCGAGTGACGAAGCTAGTCCAAGAAGCTGAAGAAGTCAAGGAACAAGACCCTCCATTACAACAAATCAAAGTCACCTGTGATTCACGCTCTTCTTGA 1101 0.4314 MKSCDEWKPFIVMIAIDFAFATVNILLKKSLQEGMNHLVFITYRLATSSIFLAPIGYFWERNGRPKLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCNSGRAKILGTVVCIGGALILTLYRGKPLFNYSHNDSAAPISKTSAVKLAPPINTEKWTIGVIALILGTLFWSSWFLVQSKIGKRYPCQYSSTAIMTFFGAIQSAILSLATGRNLSMWVLKGKMQIITVVYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPFLHEQLHLGSVLGSILVMMGLYMLLWGKNKEVQNRVTKLVQEAEEVKEQDPPLQQIKVTCDSRSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1161 366 Coils Coil 330 350 - -
Dere10g1161 366 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Dere10g1161 366 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020
Dere10g1161 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Dere10g1161 366 PANTHER WAT1-RELATED PROTEIN 8 333 IPR030184 GO:0016020|GO:0022857
Dere10g1161 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1161 Dere-ChrDere10 21893480 21897450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1161 7 260 Nodulin-like Gene Family AT3G30340 51.562 6.99e-92 275