Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1153 ATGGCTTCCGAAAACAAGTTTTCGAACTCAATGCGGGAAATCAAAGTCCAGAAGCTCGTCCTCAACATGTCTGTCGGTGAAAGTGGTGATCGTCTCATCAGAGGCGCTAAGGTTGCCTCCACATCCCTTTCCTATTTCTGTTTGATTTGGGAGATTACCGAATGTGTTAGAGCAATTGAGTGGACAAACCCCAGTATTCTCAAAAGTGAAACTGGCTGTTTTGGATTTGGTATTCAAGAGCGTATTGATCTTGGAATCAAATTTGTGGTTTGCATATTTGGAGCACCGCCACAGCTTTATGGCTTTGTCCTTGTTTCCCTTCCTAGTCGTTTTAGTTGTTTATTGCAATCTGACGACAGACATAGCTGGATGAATATGACTTGCAATTTGTCATTGCCTCACTTTACCTGGGTCTTCAGAATAGCTGATCATATTACTTCTCAAAACACAAATAACTTACAATCAAGCCTTTAACGACCCGGGTACTGTGTTGGTCGACGGCGAAGGTGCAAGTCCCGTGTTGGAATTCATCACAGGGTGACAAAAGAGGGCGCAATGAAGTGGTTCCAAGTTAAGTATGGCGTTATTCTTAACAAGTCACAACAAATTGTATCCTACAGAAGAATTATTTGA 633 0.4218 MASENKFSNSMREIKVQKLVLNMSVGESGDRLIRGAKVASTSLSYFCLIWEITECVRAIEWTNPSILKSETGCFGFGIQERIDLGIKFVVCIFGAPPQLYGFVLVSLPSRFSCLLQSDDRHSWMNMTCNLSLPHFTWVFRIADHITSQNTNNLQSSLXRPGYCVGRRRRCKSRVGIHHRVTKEGAMKWFQVKYGVILNKSQQIVSYRRII 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1153 210 Gene3D - 4 69 IPR022803 -
Dere10g1153 210 Gene3D - 138 200 IPR022803 -
Dere10g1153 210 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 69 199 IPR002132 GO:0003735|GO:0005840|GO:0006412
Dere10g1153 210 SUPERFAMILY RL5-like 9 93 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1153 Dere-ChrDere10 21781830 21783887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1153 1 203 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 40.845 1.41e-33 117