Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1152 ATGGAGGTGATCGATCCTAAAGCTAAAGGATTTGTTAATAGCCTGATGGATCATGCAAGAAGGAAAAGCAGTGGTGAGGTAATGGATCATGCTGATGAAGGCATAGATAAGGAATTGAGACTTTACGTTGAAGGAATTGCAGTGGCTGGCGGCAGATTGGGTGAGGGAACTTGTGTAAGTAGAGAAAATGGGACTTCACAAGAGATGGATAATAATGCAGGATCAAATAATGAACTACAGGAGGAGCCTGAGGAACTTATGGTTCAGGACATGTGTGATCAGCAAAAAATAAGTGATACATTTTGTGGAGTTGATCAAAGAACTAGTTGTAATTCAAGAAATTTGGATAATGACGGAACACGCAAGGCTGTAGTTATAATAGATTCAGCTGAGACCGAGTCTGTGAATAGAGACAATTGGGAATTGGAAGCAAAAGTTATCGAATCAGCATTGAGCAAGGTATCCATGAAAGCATCAAAAACAGATAACAATTCGTGCGTGAGGATTGATATAAAGTGTGGCAGTTGCCAAGGGTTTGATGAGAATTTGGATGGCGAAAGGATTTGTAGGATTTGCCATCTGGCTTCAGGGCAATCATCAGATGCAACAGCCGTTGACACTACTAATCATGCTATTAATGTGGATTTAATTCAGCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCCCACAGTCATTGTGCAGAGGCCTGGTTCAAGCTAAAAGGAAATAGATTGTGTGAAATATGTGGTGAGACTGCGAAGAATGTTTCGGATGTTGTTGATGATGAATTTATGGAGGAGGGGAATGAAATGAGATTCGCTGACATTGGTAGTACCTCATCATCACCAGGGATGTTCGGTAGATGCTGGCAGGGACAGCCATGTTGTAACTTCTTGATGGCATGCCTGGGCCTCAGCCCTGAAGATATGCAGCTTCAGCTTTTAAGTTCCCAACGCCGTATTGTTCCCCTTTTCAGCAAGCCTTATTATGGTCAGAGGTGTTCCGATTTCGCTCAAAACTAG 1026 0.424 MEVIDPKAKGFVNSLMDHARRKSSGEVMDHADEGIDKELRLYVEGIAVAGGRLGEGTCVSRENGTSQEMDNNAGSNNELQEEPEELMVQDMCDQQKISDTFCGVDQRTSCNSRNLDNDGTRKAVVIIDSAETESVNRDNWELEAKVIESALSKVSMKASKTDNNSCVRIDIKCGSCQGFDENLDGERICRICHLASGQSSDATAVDTTNHAINVDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSDVVDDEFMEEGNEMRFADIGSTSSSPGMFGRCWQGQPCCNFLMACLGLSPEDMQLQLLSSQRRIVPLFSKPYYGQRCSDFAQN 341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1152 341 Pfam RING-variant domain 189 250 IPR011016 GO:0008270
Dere10g1152 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 255 IPR013083 -
Dere10g1152 341 PANTHER ZINC FINGER, RING-CH-TYPE 67 304 - -
Dere10g1152 341 MobiDBLite consensus disorder prediction 58 80 - -
Dere10g1152 341 MobiDBLite consensus disorder prediction 59 79 - -
Dere10g1152 341 ProSiteProfiles Zinc finger RING-CH-type profile. 181 257 IPR011016 GO:0008270
Dere10g1152 341 SMART ringv_2 188 251 IPR011016 GO:0008270
Dere10g1152 341 SUPERFAMILY RING/U-box 186 253 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere10g1152 Dere-ChrDere10 21771247 21774751 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1152 167 304 C3H Transcription Factor Family AT5G05830 40.426 2.16e-23 94.4