Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1146 ATGGAAAACCTCTGTTTTCAAATTTCCTTCTCTGTGTTCTCATTGCTTTGCCTCCTGGTTTGCACCACTTTCTGTCAGACCAATTTTACTGCTGATGAATCTGCCCTTCTTGATCTCAAATTTTCTGTTAGGGACCCTTACAAGCACTTGGCTAATTGGTCCAACTCCTTTCCCATTTGCAATTGGGTTGGGGTTACATGTGATGCTCTCCATGAAAGAGTCAGAATCTTGAATCTTGGTGAGATGGGTCTCAAGGGCACCTTACCCCCACAAATTGGAAATATTTCCTTCCTAGTTGAACTTGACCTTCATGGCAACAACTTCTTTGGTCAGTTGCCAAAAGAGTTACTCCAATTACACAAATTGAAAATACTCAACTTGAGTTATAATGAATTCAATGGAGACATTCCAAGATGGATAGGAGGCTTATTTACACTTCAACACTTGATTCTCCGCAATAATAGTTTTGGGGGTGTTATTCCTCCAAGTGTATCTAATTTGTCAAAGTTAGAGACCTTGGATTGCAGACATAATTTTATCGAAGGATCTATTCCACTTGAGATTGGAAGACTCCAACATTTGAAGATTTTACGCATTGCAAGGAACATGCTTTCAGGAGCCATACCTTCAACTATTTCTAATTTGTCCTCGCTTGAGTTGATGAGTTTCACTTCCAACTCGTTAACAGGAGATATTCCCAAAGAGATCAGTGATCTTAGAAATCTGAAATTTATATACTTAGGTGTTAATAAGCTTTCAGGCCACATACCAAGGAATATTGGGAAATTGAATATGCTTCAAGATTTAGAGATGGGTGACAATAATTTAGAAGGTTCAATACCTTCGGAGGTTGGTGATCTTAGTAAGCTTACAATTTTGAACATGGGGCACAACAAATTGAGTGGACATATTCCGTCAAAAATTTTTAACATTTCAACTTTGGAAGTTTTGCATCTTGCAAACAATTCTCTGTCAGGCAGTCTTCCCTCAGATTTTGGACGTGACCTTCCAAATCTAGAGGAGTTGTTATTGTGGGGCAACAAAATTTCTGGAAGAATGCCAAGTAGTATATCCAATGCTTCTAAACTAACCACAATTGGGTTGGGAGGAAACAAATTTACCGGGACTATACCAAGCACGCTTGGGGATTTAAGATACTTGGAAATCCTTGAAATAGAAAATAACAATTTAACCACTACATATGCTCCTAATTCTGAAAGTAGCTTTCTTTGCTCAATGACAAATTGTAGATCTTTGACAAATTTGAGATTCTCAGAAAATCCATTGAATATAAAACTTTCCAAGTCCATTGGAAACTTCTCTAATTCCTTACAAGTGTTAGTTGCAAAGACTTGCGGTATTAATGGCAGCATACCATCAGAAATTGGGAATGTCAGTAACTTGGTTCAACTAAATTTGGATGATAATGTTTTGAATGGACCGGTTCCAGTAACAATTAGCAACTTACATGGTCTCCAGTATTTGAGTCTTCAAGACAATCAGTTGCACGGCTCAATTATCAATAAGCTTTGTGAAATTCGAACACTTGGCTTTTTATATCTAAGTGGAAACAAGTTTTCTGGAGCAATGCCACCCTGCTTGGGAAATCTGACCTCTTTAAGAGATCTTCACTTGGGCTCTAATAACTTGATTTCTGAGATACCCTCTTCCTTTTGGGAAATGAAAGATGTATTGAGGGTAAACTTATCATCCAATATTTTAGTTGGAAAACTTTCATTAGGGATTGGGAACCTTAAATCTCTTACATTTTTGGATTTGTCAAGAAATCAGATTTCAGGCAACATTCCTACAACCATTGGTGACTTGCAAAATTTGCAAGTTCTCTCCTTGGCGCTTAACAAACTACAAGGTTCCATTCCTAAATCACTTGGAAGTATGCTAAGCTTAGAATTTGTAGACCTTTCCCATAACAACTTGTTTGGTGAGATCCCTAAGTCCCTCGAGTCACTTGCCTATCTTAAGTATGTCAATTTCTCTTTTAACAAACTACAAGGAGAGATTCCTTCTGGTGGGGTTTTCAGAAATTTGACCGCTGAATCTTTCTTGATGAATGAAGCACTTTGTGGCAAGCCACAATTGCTAGTGCCACCGTGCAAAAAGGGAGCAAGGCAAAAGTTAATGGCGAGACTGCATTTATTGATATACATATTACTTACAGTTCTGTTAATATTTTTGGTTGTTTCATGCATTGTCCTTCTACGACATAAACGACAAAATTCAAGTGATCCTGTTGAAAGGGACTTATCAACTTTAGAAGTGCCAAGGAGGATTTCTTATTTTGAAATAGCAAATGCAACCAATGGATTTGATGAGAGTAACTTACTTGGAAAGGGAAGTTATGGTTCTGTATTTAAAGGAAAGCTTTCGAGTGGAATGATGGTTGCTATCAAAATATTCAATTTGGATTCTGAATTAATGTCAAGGAGCTTTGAAGTGGAATGCGATGCAATGCGCAATCTACGCCATCGCAATCTGGTCAAGATCATTAGTAGTTGTTCCAATGTTGATTTCAGGTCTTTGATAATGGAGTTCATGCCCAATGGGAGCCTCGAGAAATGGTTATATTCTCATAACTATTGTTTAGATTTTCTACAAAGGTTGAATGTAATGATAGATGTGGCATCTGCTTTGGAATATCTTCATTATGGGCTGTCAACACCAGTGGTACACTGTGATCTAAAGCCAAGCAATATTTTGTTGGATGATGATATGACTGCTCATGTGAGTGACTTTGGAATTTCCAAACTTCTAGATGAAGAACAATCTATGACATACACACAAACATTGCCTACCATTGGCTATATTGCACCAGAGTATGGGTATGCTGGAGTTGTTTCAACAAAAGTAGATGTATATAGCTATGGAATTATACTAATAGAAGTATTCACAAGAAGAAAGCCAACAGAAGATATCTTTGTCACGGGACTGAGCTTGAAGAGTTGGGTAAGTCAGTCAATACCGCATGCAATAATTCAAGCCATTGATTCCAACTTATTACAGGGAGATGAACAACATATTGGTAACATAATGACATCTGCATCCTCAATTTTTGAACTGGCCTTGACTTGCTGCACCGATTTTCCTGCAACACGGAGAAATATGAGAGATGTTGTAGTGTCATTAAACAAAATCAAGGTCACGTTTATGCAAAGGCAACGGCATCATATTTGA 3192 0.3766 MENLCFQISFSVFSLLCLLVCTTFCQTNFTADESALLDLKFSVRDPYKHLANWSNSFPICNWVGVTCDALHERVRILNLGEMGLKGTLPPQIGNISFLVELDLHGNNFFGQLPKELLQLHKLKILNLSYNEFNGDIPRWIGGLFTLQHLILRNNSFGGVIPPSVSNLSKLETLDCRHNFIEGSIPLEIGRLQHLKILRIARNMLSGAIPSTISNLSSLELMSFTSNSLTGDIPKEISDLRNLKFIYLGVNKLSGHIPRNIGKLNMLQDLEMGDNNLEGSIPSEVGDLSKLTILNMGHNKLSGHIPSKIFNISTLEVLHLANNSLSGSLPSDFGRDLPNLEELLLWGNKISGRMPSSISNASKLTTIGLGGNKFTGTIPSTLGDLRYLEILEIENNNLTTTYAPNSESSFLCSMTNCRSLTNLRFSENPLNIKLSKSIGNFSNSLQVLVAKTCGINGSIPSEIGNVSNLVQLNLDDNVLNGPVPVTISNLHGLQYLSLQDNQLHGSIINKLCEIRTLGFLYLSGNKFSGAMPPCLGNLTSLRDLHLGSNNLISEIPSSFWEMKDVLRVNLSSNILVGKLSLGIGNLKSLTFLDLSRNQISGNIPTTIGDLQNLQVLSLALNKLQGSIPKSLGSMLSLEFVDLSHNNLFGEIPKSLESLAYLKYVNFSFNKLQGEIPSGGVFRNLTAESFLMNEALCGKPQLLVPPCKKGARQKLMARLHLLIYILLTVLLIFLVVSCIVLLRHKRQNSSDPVERDLSTLEVPRRISYFEIANATNGFDESNLLGKGSYGSVFKGKLSSGMMVAIKIFNLDSELMSRSFEVECDAMRNLRHRNLVKIISSCSNVDFRSLIMEFMPNGSLEKWLYSHNYCLDFLQRLNVMIDVASALEYLHYGLSTPVVHCDLKPSNILLDDDMTAHVSDFGISKLLDEEQSMTYTQTLPTIGYIAPEYGYAGVVSTKVDVYSYGIILIEVFTRRKPTEDIFVTGLSLKSWVSQSIPHAIIQAIDSNLLQGDEQHIGNIMTSASSIFELALTCCTDFPATRRNMRDVVVSLNKIKVTFMQRQRHHI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1146 1063 SUPERFAMILY Protein kinase-like (PK-like) 754 1048 IPR011009 -
Dere10g1146 1063 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Dere10g1146 1063 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Dere10g1146 1063 SUPERFAMILY L domain-like 441 699 - -
Dere10g1146 1063 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 852 1061 - -
Dere10g1146 1063 SMART LRR_typ_2 239 263 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 537 561 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 336 360 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 287 311 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 191 215 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 633 657 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 119 143 IPR003591 -
Dere10g1146 1063 SMART LRR_typ_2 585 609 IPR003591 -
Dere10g1146 1063 Pfam Leucine rich repeat 587 646 IPR001611 GO:0005515
Dere10g1146 1063 Pfam Leucine rich repeat 98 155 IPR001611 GO:0005515
Dere10g1146 1063 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Dere10g1146 1063 Pfam Protein kinase domain 777 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1146 1063 ProSiteProfiles Protein kinase domain profile. 776 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1146 1063 FunFam Serine-threonine protein kinase plant-type 756 851 - -
Dere10g1146 1063 PANTHER OS04G0122200 PROTEIN 285 1056 - -
Dere10g1146 1063 SUPERFAMILY RNI-like 77 430 - -
Dere10g1146 1063 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 29 183 - -
Dere10g1146 1063 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Dere10g1146 1063 Gene3D Phosphorylase Kinase; domain 1 757 851 - -
Dere10g1146 1063 SMART serkin_6 776 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1146 1063 Gene3D Ribonuclease Inhibitor 192 265 IPR032675 -
Dere10g1146 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 412 709 - -
Dere10g1146 1063 Gene3D Transferase(Phosphotransferase) domain 1 852 1062 - -
Dere10g1146 1063 Gene3D Ribonuclease Inhibitor 266 405 IPR032675 -
Dere10g1146 1063 Gene3D Ribonuclease Inhibitor 406 713 IPR032675 -
Dere10g1146 1063 ProSitePatterns Protein kinases ATP-binding region signature. 782 804 IPR017441 GO:0005524
Dere10g1146 1063 SMART LRR_sd22_2 336 362 - -
Dere10g1146 1063 SMART LRR_sd22_2 167 188 - -
Dere10g1146 1063 SMART LRR_sd22_2 287 313 - -
Dere10g1146 1063 SMART LRR_sd22_2 537 556 - -
Dere10g1146 1063 SMART LRR_sd22_2 191 217 - -
Dere10g1146 1063 SMART LRR_sd22_2 489 511 - -
Dere10g1146 1063 SMART LRR_sd22_2 239 262 - -
Dere10g1146 1063 SMART LRR_sd22_2 585 611 - -
Dere10g1146 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 197 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1146 Dere-ChrDere10 21623278 21630990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1146 562 676 Receptor kinase-like Gene Family AT3G47570 34.532 1.27e-11 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere10g1146 Pkinase 6.7e-44 CL0016