Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1140 ATGGCGGAGAACACCGTTCCGACCACCAATCCCAGACCCATCACCCCCACCACCGCCAAGAAGAAGAACAACGCCGAACTCCTACTGGGGCGCTTCGAAATCGGCAAGCTCCTCGGCCATGGAACCTTCGCTAAGGTCTACTACGCTCGAAACATCAAAACCAACGAAGGCGTCGCCATCAAGATCATCGACAAAGAGAAAGTCCTCAAGGGAGGCCTAGTCGCTCACATCAAGCGCGAGATCTCTATCCTCCGCCGCGTGCGCCACCCCAACATCGTCCAGCTCTTCGAGGTCATGGCCACGAAGACGAAGATCTACTTCGTCATGGAATACGTCCGAGGCGGTGAGTTATTCAACAAAGTCGCCAAAGGCCGATTGAAGGAAGAAGTCGCCAGAAAGTATTTCCAGCAATTGATCTCCGCCGTCGGATTCTGTCACGCCCGAGGCGTCTACCACCGAGATCTCAAGCCTGAAAACTTGTTGCTAGACGAAAATGGCGATCTCAAGGTTTCTGACTTTGGCCTCAGCGCTGTGTCTGATCAAATCCGACAAGATGGGTTGTTTCACACTTTTTGTGGGACACCTGCGTATGTTGCCCCTGAGGTTCTGGCTAGAAAAGGATACGATGGTGCTAAGGTCGATCTCTGGTCTTGTGGGGTCATCTTGTTTGTTTTAATGGCAGGCTATTTACCATTTCATGACCAGAACGTCATGGCCATGTATAAGAAGATTTACAGAGGCTTATTCAGGTGTCCCAAGTGGTTCTCACCTGAGCTAAACAGTTTATGCACTCGTCTTCTTGATACAAATCCACAAACAAGAATTGCGATTCCGGAGATTATGGAGAACAAGTGGTTCAAGAAAGGGTTCAAACAGATTAAGTTCTATTTCGAGGAAGATAAGCTCTGTACTAGTTTTGACGATAAGCTGGATTTTAATATTAAAGACGAAATGGAATCAATCTCAGACTACTCAATATCTGAATCTGATTCAGAGTTAGAGACTAGAAGGAGGAACAATGCTTCATTGCCACGACCAGCAAGTCTGAACGCTTTTGATATAATATCATTTTCTCCAGGCTTCGATCTTTCTGGATTGTTCGAGGAAAAAGGAGACGAGGCGAGGTTCGTGTCGAGGGCTTCAGTGCCTGAGATAATATCGAAACTGGAGGAAATTGCACAGTTGGTTAGCTTCACTGTGAGGAAGAAGGATTGCAGGGTGAGCCTGGAGGGTTCAAGAGAAGGTGTGAAGGGGCCATTGACGATTGCTGCAGAAATATTTGAGCTAACGCCTTCTTTGGTGGTGGTGGAGGTGAAAAAGAAAGCAGGAGATAAAGCAGAGTATGAGCAGTTTTGTAACACTGAATTGAAACCTGGGTTGCAGAAGTTGATGATGGTGGAATCTGCAGCTTCTTCTAACATAACTTCTAATTCAAATACTGAACCTTTGCAATTACCTTCGGATTATGACTCTGAGATTCCTCCTTGCACACCTTCTGATACAGAATAG 1509 0.4665 MAENTVPTTNPRPITPTTAKKKNNAELLLGRFEIGKLLGHGTFAKVYYARNIKTNEGVAIKIIDKEKVLKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVILFVLMAGYLPFHDQNVMAMYKKIYRGLFRCPKWFSPELNSLCTRLLDTNPQTRIAIPEIMENKWFKKGFKQIKFYFEEDKLCTSFDDKLDFNIKDEMESISDYSISESDSELETRRRNNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSRASVPEIISKLEEIAQLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKAGDKAEYEQFCNTELKPGLQKLMMVESAASSNITSNSNTEPLQLPSDYDSEIPPCTPSDTE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1140 502 Gene3D Kinase associated domain 1, KA1 345 465 - -
Dere10g1140 502 Pfam NAF domain 346 402 IPR004041 GO:0007165
Dere10g1140 502 SUPERFAMILY Protein kinase-like (PK-like) 28 302 IPR011009 -
Dere10g1140 502 CDD CIPK_C 350 461 - -
Dere10g1140 502 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Dere10g1140 502 FunFam Non-specific serine/threonine protein kinase 23 111 - -
Dere10g1140 502 MobiDBLite consensus disorder prediction 470 486 - -
Dere10g1140 502 FunFam Non-specific serine/threonine protein kinase 21 335 - -
Dere10g1140 502 MobiDBLite consensus disorder prediction 470 502 - -
Dere10g1140 502 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1140 502 Gene3D Transferase(Phosphotransferase) domain 1 21 344 - -
Dere10g1140 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Dere10g1140 502 FunFam Non-specific serine/threonine protein kinase 346 464 - -
Dere10g1140 502 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 457 - -
Dere10g1140 502 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1140 502 CDD STKc_SnRK3 31 285 - -
Dere10g1140 502 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1140 502 ProSiteProfiles NAF domain profile. 344 368 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1140 Dere-ChrDere10 21486846 21488354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1140 27 502 CBL-interacting serine-threonine protein kinases AT4G18700 76.715 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere10g1140 Pkinase 1.9e-73 CL0016