Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1136 ATGCCTTCAACAATGTCCGATGATGATGATGCAGTGGAAGGAAACGAACTGCAGTTGATGGGGATCACTGGACCATTCATGAAAGGGATATTCCCGCACTTGTTCTTTGCCAAAAGGGGTAGAAAAGAATCTAATTTTCTCCTACACAAGTCAAACGGTGTCGTTTACATCTGGTGGCCATATACATCGCAGCGAATCTCATGCTTCCAAATCCAATTCCTCCATCTCACAGTTATGGCGATGTCAAATCAAGCACCATCATCGTCTACATCTTCCCCCTGCGGATCCAATTACAGCTATTATGATGTTTTCCTGAATTTCAGTACCGAATCAACATTCACTAGGACTCTCCGCGACGCTTTGCGCAAGAAGGGAATTAACAATATCTTCATCGATCGCAACAAGAAACGAAGGAAAAGGAAGAGGAAACGAATTTCTGCATCTCCTGATCCTCTCAGAGCAATTGAAAAGTCGAGGATTTCGATTGTTGTGTTCTCTGAGAACTATGCATCTTCCACAGCTTGCTTGGATGAGCTCCTCCAGATTCTGAAGTGCAGGGGGAAGAAGAAGCAAGTGGTGTTTCCGATCTTCTACGAAGTAGAACCATCTGATGTGCGACATCAGAGAAATAGGTATAGAGAAGCCATGGCTGCACATGAGCACAGCTTCAAACACGATTCTCCCAACGTTGAGAAATGGAGGTCGGCTTTGAACGAAGCCGCCGGCTTGTCGGGATGGCATTTCCGAGATGGGTTCGAATATGGGACTGTTGAGAGGATTGTTGAAGAGGTATATTCCAAGTTACCTCCTAAACGCTTACATACTGGGGACCACATAGTTGGACTTGACACTTGCATAGAAGAAGTGAAGTCATTTCTCAGTACCGTGTCCACTTTGGGGATTCATGGAACTGCTGGAATTGGCAAAACGACACTTGCCAAAGCTGTGTACAATTCAATTTTCCACCAATTCGAAGGTGCTAGTTTTCTTTTCAACGTCAGAGAAGCTTCAAAACGACACAAGGGCATGGTACGTCTCCAACAGACACTTCTATCAGAGACTTCCGATGAGAAGAAAAAGATTAAGTTGAGTAGTGTTGAAGAAGGGATCTCTAAAATAAAGCAAAGGCTGTGCCATAAAAGAGTTCTTCTGGTTCTTGATCACGTGGATGAGGCAGAACAGTTAGAACAACTGGTGGGAGACTGTAATTGGTTAGGAAACGGTAGCAGAATGATTATAACGACAAGGAATAAGCAATTACTAATTGATTGTCGTATTGAGAAGGAATATCAAGTGAAGGAGCTAAACGACAATGAATCTCTTGAGCTTTTTTCTTGGTATGCCTTTCACTTGGGGAAGCCTGCAATAGGGTATGAAGATGTGTCTAAACGTGTAGTGAGTTATGCACAAGGCCTTCCTTTGGCTTTGAAAGTGATCGGCTCCAATCTAAAGCATAAGAGTTTGGAGGCGTGGGAATGTGCATTGGAACACTACGAAGGAATTCCAGAAAGAAAGGTTCAAGATGTTCTAAAAATAATGGGAAAGATGGATACACTGATGGGATAA 1566 0.433 MPSTMSDDDDAVEGNELQLMGITGPFMKGIFPHLFFAKRGRKESNFLLHKSNGVVYIWWPYTSQRISCFQIQFLHLTVMAMSNQAPSSSTSSPCGSNYSYYDVFLNFSTESTFTRTLRDALRKKGINNIFIDRNKKRRKRKRKRISASPDPLRAIEKSRISIVVFSENYASSTACLDELLQILKCRGKKKQVVFPIFYEVEPSDVRHQRNRYREAMAAHEHSFKHDSPNVEKWRSALNEAAGLSGWHFRDGFEYGTVERIVEEVYSKLPPKRLHTGDHIVGLDTCIEEVKSFLSTVSTLGIHGTAGIGKTTLAKAVYNSIFHQFEGASFLFNVREASKRHKGMVRLQQTLLSETSDEKKKIKLSSVEEGISKIKQRLCHKRVLLVLDHVDEAEQLEQLVGDCNWLGNGSRMIITTRNKQLLIDCRIEKEYQVKELNDNESLELFSWYAFHLGKPAIGYEDVSKRVVSYAQGLPLALKVIGSNLKHKSLEAWECALEHYEGIPERKVQDVLKIMGKMDTLMG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1136 521 Gene3D - 434 515 IPR042197 -
Dere10g1136 521 ProSiteProfiles NACHT-NTPase domain profile. 297 392 IPR007111 -
Dere10g1136 521 Pfam NB-ARC domain 285 498 IPR002182 GO:0043531
Dere10g1136 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 512 IPR027417 -
Dere10g1136 521 ProSiteProfiles TIR domain profile. 99 268 IPR000157 GO:0007165
Dere10g1136 521 Pfam TIR domain 101 247 IPR000157 GO:0007165
Dere10g1136 521 SUPERFAMILY Toll/Interleukin receptor TIR domain 91 246 IPR035897 -
Dere10g1136 521 Gene3D - 270 432 IPR027417 -
Dere10g1136 521 Gene3D - 98 269 IPR035897 -
Dere10g1136 521 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 101 512 IPR044974 GO:0006952
Dere10g1136 521 SMART till_3 100 243 IPR000157 GO:0007165
Dere10g1136 521 PRINTS Disease resistance protein signature 469 483 - -
Dere10g1136 521 PRINTS Disease resistance protein signature 376 390 - -
Dere10g1136 521 PRINTS Disease resistance protein signature 298 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1136 Dere-ChrDere10 21426722 21433416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1136 154 481 WRKY Transcription Factor Family AT4G12020 30.149 3.15e-37 145