Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1095 ATGGTGATCAATCTTGGCAACCCAATATGTTTGGATGAAGGATTTTGTTTTCGTTTTGTCACGTTTGAAAGCACTGTATGGCAATGCATTTTGAGGGCTTTATCATCTTGGTCACAAATAAGTATACTTGGTGCTTTCTCTTCTGCTTATCACTATGTTGTATGTATTGGAATAAGACTGAATGCAACCAAACGGTGTGGCTATGACTATGGGTTTGATCTGTATTGTTCTGAAACGAACCAGACAATCCTCGATCTGCCTTTATCTGTCAAGGTTACAGTCCACAACATAGACTATAAATCACAAGTCTTAACTGTGTCTGAACCTGAAGGATGCCTTGCTCATCTCAATTTATCTGCATCTCCTTCTAAGTTCCTTAGTAACAATGAATCAGGTGCATATGCATTATTCAATTGTTCAGGGACATTTCCTAGAAATGCATATAGCAGATACTTTTCAATATGGGGTAAATTTTCTTGCCTCGATGTTGCTGGCTATAAAGTTATAGCCATACCATCTACGGATAGAATCATGGACAATCCCCTTATATCTTGCACTAAAATTCATAGCTATAATCAGTTAATTCATTTATTTATTCTTGCAGGTTCGTTAAACGGGAAAGCATTTGCAGGTGAAATCCTAGGCCCATTTCTGCTCATATTTGTTGCTGTTAAGCTCCTTAACACTTCAACAGGGAATAGACGAGAGTTTTTTAATGAAATGGAAACAATGTGTCAAATTCACCTTGTCAATGTGGCTCGTCTGGTTGGCTTCTGTGCTGAGGGACACAGACGAGCTTTGGTGTATGAATTTTTACCACATGGTTCTCTGCAAAATTCATGA 843 0.382 MVINLGNPICLDEGFCFRFVTFESTVWQCILRALSSWSQISILGAFSSAYHYVVCIGIRLNATKRCGYDYGFDLYCSETNQTILDLPLSVKVTVHNIDYKSQVLTVSEPEGCLAHLNLSASPSKFLSNNESGAYALFNCSGTFPRNAYSRYFSIWGKFSCLDVAGYKVIAIPSTDRIMDNPLISCTKIHSYNQLIHLFILAGSLNGKAFAGEILGPFLLIFVAVKLLNTSTGNRREFFNEMETMCQIHLVNVARLVGFCAEGHRRALVYEFLPHGSLQNS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1095 280 Pfam Wall-associated receptor kinase galacturonan-binding 60 107 IPR025287 GO:0030247
Dere10g1095 280 Pfam Protein tyrosine and serine/threonine kinase 222 279 IPR001245 GO:0004672|GO:0006468
Dere10g1095 280 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 61 189 IPR046948 -
Dere10g1095 280 Gene3D Phosphorylase Kinase; domain 1 200 279 - -
Dere10g1095 280 Coils Coil 274 280 - -
Dere10g1095 280 SUPERFAMILY Protein kinase-like (PK-like) 221 279 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1095 Dere-ChrDere10 20314284 20316804 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1095 222 279 Receptor kinase-like Gene Family AT1G66910 50.000 2.54e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere10g1095 PK_Tyr_Ser-Thr 6.8e-09 CL0016