Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1093 ATGAAACAACACTTGGATGTCAGGCATGGCCGTGAGGTCATTTTGTTCAGAAATGGAATTCCTTTCTTATTCTTCTGCTTCTTAACTATGTTTGCAGAACCAGGTTCCTCTGACCCATGCATAGAATCAAGGTGCAATGTCTACGAACCAGATATTCGATTCCCGTTTAGGCTTAAAGGAAAACAACCAGAACGGTGTGGCTATAATTCTGGATTTGATCTCTACTGCGATGAAACAAACCAGACAGTCCTCGAGCTGCCTTTTTCCGTCAAGTTTTCTGTCGATAAAATCGACTATGAATCACAAGTCTTAACTGTGTCTTACCTTCAAGGATGCCTTGCATATCTCAATTTATCTGCATCTCATTTTTCGTTCCATGATAACCATGAATCAGATGGATATGCATTATTCAATTGTTCAGGGACCTCTCGTAGAAGTAGTACGCACTTTTCAATAGGGGAGAACTTTTCTTGCCTCGATGTGTCTGGCTATGAAGTTATAGCCATATCATCTAGTGATAGAATCATGGACAATCCCCTTTTATCTTGCACTAGAATTCATAGCTATGAATCGGTGCCCAATTCTCTTTACAATAACATCGACTTTCTAAATCTACTTTGGGACCAACCAGATTGCAGAAAGTGCGATGGCGGGCAATGTAAATTGAAAGAAAACAAATTTCAACGCGAACCAGAATGTATCCCCAGCCCTCGTACAGGTTCATCAAAAGCGAAAGCACTTGCAGGTAAACTCCTAGGCCCATTTCTGCCTATATTAGTCGGGGTTGTTGTCTACTGTTTCTATTACCATGAGAGGCAGAGTTACAAAAAGATCAAACAGTTTTTGGAGGACTACAAAGCACTTAGGCCAGCCAGATACACGTATGCAGACGTAAAGAGAATCACAAATCAGTTCAAGGATGAACTTGGACAAGGAGCTTTTGGAACTGTCTTTAAAGGGAAGCTGTCCAATGAAATTCAGGTTGCTGTTAAGCTTCTAAACACTTCAACGGGGAATGGGCAAGAGTTCATCAATGAAATGGAAACAATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGTGGCACCCAGCAAATCGTCCAACCATGAAAGCTGTGGTTCAAATGCTAGAAGGAGATGGAGAAAAGTTAATTATGCCTCCTAATCCATTTGGCTCTACACCTCCAACTAGAAAAAGGGCTATTGGACCAAAGCGTCTGACCCCAGAGTTATCAATCATATCTGAAACGGAGTGA 1257 0.4153 MKQHLDVRHGREVILFRNGIPFLFFCFLTMFAEPGSSDPCIESRCNVYEPDIRFPFRLKGKQPERCGYNSGFDLYCDETNQTVLELPFSVKFSVDKIDYESQVLTVSYLQGCLAYLNLSASHFSFHDNHESDGYALFNCSGTSRRSSTHFSIGENFSCLDVSGYEVIAISSSDRIMDNPLLSCTRIHSYESVPNSLYNNIDFLNLLWDQPDCRKCDGGQCKLKENKFQREPECIPSPRTGSSKAKALAGKLLGPFLPILVGVVVYCFYYHERQSYKKIKQFLEDYKALRPARYTYADVKRITNQFKDELGQGAFGTVFKGKLSNEIQVAVKLLNTSTGNGQEFINEMETMCQIHHVNVARLWHPANRPTMKAVVQMLEGDGEKLIMPPNPFGSTPPTRKRAIGPKRLTPELSIISETE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1093 418 ProSiteProfiles Protein kinase domain profile. 303 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1093 418 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 22 276 IPR046948 -
Dere10g1093 418 SUPERFAMILY Protein kinase-like (PK-like) 287 364 IPR011009 -
Dere10g1093 418 Pfam Wall-associated receptor kinase galacturonan-binding 40 106 IPR025287 GO:0030247
Dere10g1093 418 MobiDBLite consensus disorder prediction 385 418 - -
Dere10g1093 418 Pfam Protein tyrosine and serine/threonine kinase 305 365 IPR001245 GO:0004672|GO:0006468
Dere10g1093 418 Gene3D Phosphorylase Kinase; domain 1 275 374 - -
Dere10g1093 418 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1093 Dere-ChrDere10 20295848 20297877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1093 171 385 Receptor kinase-like Gene Family AT1G66910 30.802 1.94e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere10g1093 PK_Tyr_Ser-Thr 6.3e-11 CL0016