Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1091 ATGAACCAGACAATCCTCGATCTGCCTTTATCTATCAAGGTTACAGTCCACAACATAGACTATAAATCACAAGTCTTAACTGTGTCTGACCTTGAAGGATGCCTTGCTCATGTCAATTTATCTGCATCTCCTTTTATGTTCCTTGGTAACAATGAATCAGGTGCATATCCATTGTTCAATTGTTCAAGGATGTCTCCTAGAAATGCATATAGCATATACTTTTCAATATGGGGTTCATTAAATGGGAAAGCACTTGCAGGTGAAATCCTAGGCCCAGTTCTGCTCATATTTGTCGAGGTTGTTGTCTATTGTTTTTATGTGGCACGCCTTGAGAGGCATAGTTACAACAGGATTAAAAAGTTTCTGGAGGACTACAAAGCACTTAAGCCTGCTAGATTCTCATATCCAGATAGAAAGAGAATTACAAATGAATTCAAGGAAGAACTAGGACAGGGAGCATATGGAACTGTTTTCAAAGGGAAGCTGTCCAATGAAATTCAGGTTGCTGTTAAGCTCCAAAACACTTCAACAGGGAATGGACGAGAGTTCATTAATGAAATGGAAACAATGTGTCAAATTCACCATGTCAATGTGGCTCGCTTGGTTGGCTTCTGTGTTGAGGGACACAGACGAGCTTTGGTGTATGAATTTTTACCACATGGTTCTCTGCAAAAATTCATAACCTTCAGTTGA 693 0.3954 MNQTILDLPLSIKVTVHNIDYKSQVLTVSDLEGCLAHVNLSASPFMFLGNNESGAYPLFNCSRMSPRNAYSIYFSIWGSLNGKALAGEILGPVLLIFVEVVVYCFYVARLERHSYNRIKKFLEDYKALKPARFSYPDRKRITNEFKEELGQGAYGTVFKGKLSNEIQVAVKLQNTSTGNGREFINEMETMCQIHHVNVARLVGFCVEGHRRALVYEFLPHGSLQKFITFS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1091 230 ProSiteProfiles Protein kinase domain profile. 143 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1091 230 SUPERFAMILY Protein kinase-like (PK-like) 125 227 IPR011009 -
Dere10g1091 230 Pfam Protein tyrosine and serine/threonine kinase 144 228 IPR001245 GO:0004672|GO:0006468
Dere10g1091 230 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Dere10g1091 230 Gene3D Phosphorylase Kinase; domain 1 107 217 - -
Dere10g1091 230 PANTHER OS07G0415500 PROTEIN 90 229 - -
Dere10g1091 230 FunFam serine/threonine-protein kinase PBS1-like 111 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1091 Dere-ChrDere10 20270711 20271834 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1091 79 228 Receptor kinase-like Gene Family AT1G66910 40.506 5.96e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere10g1091 PK_Tyr_Ser-Thr 1e-18 CL0016