Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1085 ATGGAAGCTGAGAGGGACGGAGCGGTGGAGCTTTTAGAGACCGAAGAGAAGAAAAGAGAAAAAAAGGAAGGAGAAAGGGGACTGCTGACACATGACTTGCTCCCTCTGGGCATATCAGACAACATCGTCTTCGCCTCGACCTCTGGTTCTTCACACATTTTCAAGAGTTCCAAATGGCCACAAGAATCGTCCCTCCACAACAAGAAGCCAAAGGTGGCAATTAGAGGAATAGAGGTCGTTAAGCCTAACCGTCCTGTCACGAGGAGTTTTCGTGCCCAACTACTTGCTAATGCCCAAGCTGCAGCTGAAAACAAAAATAAACAGGCTTGTGTTAATGTCGCTGGACCTCATCCTGTTCTTGAAGGCGTTGTAATTGCTAAAAGAGCCACACCCAAGCCTGCTCGGAATATAATCTCTGTTAAACCCAGGAGTGAAGATGTTATTGAAATAAGCTCAGAAGAAGAAAATAGAAAAGAGAAGTCAGTGAGCAAGAAAACAGAAGCAGATGGAAACTCAAAGAAGAAACCACATACTCTTACTTCAGTTCTTACAGCTCGAAGCAAGGCAGCATGTGGTATGACTAACAAACCAAAGGAGCAGATTGTCGACATTGATGCAACTGACACTGGTAATGAGCTTTCTGCCGTGGAATATATTGAAGAAATTTACAAGTTCTATAAGCTGGTTGAGAATGAGAGTCGTCCTCGTGACTACATTGACTCCCAACCTGAAATTAATGAAAAGATGAGAGCAATATTGATTGATTGGCTCATAGATGTCCACTCCAAGTTCAATCTTTTGGTTAAAACTCTTTATCTAACTATCAATATAATTGATCGGTTCCTTTCAACCAAAACCATGCCAAGAAGGGAACTTCCATTGGTTGGCATCGGTGCCATGTTTGTGGCCTCCAAATATGAAGAAATTTGGCCCCCTCAGGTCAACGACTTTGTATGCCTCTCAGACAGAGCTTATACACATGAACAGATACTTGTAATGGAGAAAATCATACTGGGCAAGCTGGAATGGACTTTGACTGTGCCTACACATTATGTGTTCCTTATTTGTTTCATCAAGGCATCAATTCCAAATGATAAGATGGAAAGTATGGCGCATTTTCTTTCTGAGTTGGGAATTATGAATTATGCCACCATGATAATGTATAGCCCATCGATGATTGCTGCCTCAACAGTCTATGCCACTCAGTGCACTCTAAATAAGAGCCCCACTTGGAATGAGATACTCAATCTACATACAGGCTACTCAGAAGAACAACTGATTGATTATGCAAGACTCTTGGTGAACTTCCACAGCATGGCTGGGAGTGGGAAGCTTCAGGTTGTGTACAGAAAGTACTCACATCACAAGAGAGGAGCAGTCGCATGCTTCCACCACTTTTGGCGGGGAGTGGTGCTGGAGATCTTGGTGGCACTAGGCGTCATTCGATCTCACCATTTCTGGTTCGACGTGGAGCCACTTGAGGAGGCCGCGGTGGTACGTGAGGTTGTGGTCATTGGCTACGTGCATGTTGACTGCAGGAAGGCACACTCTTTCATTTCTTGA 1563 0.4408 MEAERDGAVELLETEEKKREKKEGERGLLTHDLLPLGISDNIVFASTSGSSHIFKSSKWPQESSLHNKKPKVAIRGIEVVKPNRPVTRSFRAQLLANAQAAAENKNKQACVNVAGPHPVLEGVVIAKRATPKPARNIISVKPRSEDVIEISSEEENRKEKSVSKKTEADGNSKKKPHTLTSVLTARSKAACGMTNKPKEQIVDIDATDTGNELSAVEYIEEIYKFYKLVENESRPRDYIDSQPEINEKMRAILIDWLIDVHSKFNLLVKTLYLTINIIDRFLSTKTMPRRELPLVGIGAMFVASKYEEIWPPQVNDFVCLSDRAYTHEQILVMEKIILGKLEWTLTVPTHYVFLICFIKASIPNDKMESMAHFLSELGIMNYATMIMYSPSMIAASTVYATQCTLNKSPTWNEILNLHTGYSEEQLIDYARLLVNFHSMAGSGKLQVVYRKYSHHKRGAVACFHHFWRGVVLEILVALGVIRSHHFWFDVEPLEEAAVVREVVVIGYVHVDCRKAHSFIS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1085 520 SMART cyclin_7 255 339 IPR013763 -
Dere10g1085 520 SMART cyclin_7 352 435 IPR013763 -
Dere10g1085 520 MobiDBLite consensus disorder prediction 149 177 - -
Dere10g1085 520 PANTHER CYCLINS 166 458 IPR039361 -
Dere10g1085 520 Pfam Cyclin, N-terminal domain 221 345 IPR006671 -
Dere10g1085 520 SUPERFAMILY Cyclin-like 211 345 IPR036915 -
Dere10g1085 520 FunFam G2/mitotic-specific cyclin-1 343 461 - -
Dere10g1085 520 CDD CYCLIN_AtCycB-like_rpt1 198 343 - -
Dere10g1085 520 Gene3D - 235 346 - -
Dere10g1085 520 Gene3D - 221 461 - -
Dere10g1085 520 MobiDBLite consensus disorder prediction 1 26 - -
Dere10g1085 520 Pfam Cyclin, C-terminal domain 348 463 IPR004367 -
Dere10g1085 520 FunFam G2/mitotic-specific cyclin 234 342 - -
Dere10g1085 520 MobiDBLite consensus disorder prediction 149 174 - -
Dere10g1085 520 ProSitePatterns Cyclins signature. 250 281 IPR006671 -
Dere10g1085 520 SUPERFAMILY Cyclin-like 347 464 IPR036915 -
Dere10g1085 520 SMART Cyclin_C_2 348 466 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1085 Dere-ChrDere10 20175439 20177425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1085 120 463 Core Cell Cycle Gene Families AT4G37490 55.301 3.90e-125 371