Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1081 ATGCCTAATTCTTCTTCTTCTTCTTCATCTTCTTCTATCTGGGCAGTATCTTCCAAAAAGCTTCAATTCTTCACTCGTATCAGACGTTTTCTGCAATCCAAATCTTCCCGAAAGCGCAACGATGCGTCCGATCATCTTGGCATCGTAAAAGCCAAAGCAGATAATAACGAGAAGGTTGAAAAGCTTGAAGTAGTACAAGTTGTACAGAAACAGAGTGAGAGTAGTGAGGAAGAAGAGTCTGTGATTACGTTGCAGAGGTCCGTGAAGAAGCTTCACTTTGGTAATTGGGAAGAGAAGGAGGTAGCAGCAAAAGCCATTGAAATTCTAGCTAAACAAGATGTCAAGGCTCGCAAATTGATCACAGAGCTCGGAGTGGTGCCGGTGCTCGTGTCCATGGCGGTTTCCGATGTTGCTAGCCGCCGCCGATCCTCCGTGAAGGCGTTGATTCAGCTTGCTAACGGAAGCTTCACGAACAAGGCCATGATAGTGGAAGCAGGTATACTGTCCAAGCTGCCAAAAAGAATTGACCTTGTGGATGAATCAACAAGAAGTGAATTTTCAGAGTTGCTTCTGTCACTGTCATCTCTGGCAAACACCCAATTCCCTTTTACTTCATTGGAGTTTCTTCCATTTCTCAGAGACATTCTTCAGTCAAACTCAAGTTTTGACACCAAAAACTCATGTTTGGGAGCTTTATACAATCTCTCAACTGTATTAGAGAATGGAGGGCCTTTGGTTTCTAGTGGGATTGTTCCTATTCTTCTGGAACTTTCCTCAGTGAAAGAAGTTTCAGAGAAAGCACTAGCCAATCTGGGGAACTTAGTGGTGACTTTGATGGGGAAGAAAGCAATAGAACATAGCCCAATGGTACCAGAGAGCTTGATAGAGATTCTGTCATGGGAAGATAAACCAAAATGCCAAGAGATTTCAGCTTATGTTTTGATGATTCTTGCTCATCAGAGCTCATCACAGAGAGAAAAAATGGCCAAGGCAGGGATTGTTCAAGTGCTTCTTGAAGTGGCTCTGTTGGGGAGCACACTGGCTCAGAAGAGAGCATTGAAGCTATTGCAATGGTTTAAGGATGAAAGGCAAGTGAAAATGGGCCCACATTCAGGCCCACAAACATCAAGAACAGCAATGGGTTCTCCTGTAAATCAAATGGAGGCAAAAGAAGGGAAGAGAATGATGAAGAGTTTGGTTAAACAAAGTTTACATAGGAATATGGAAATAATAACAGAAAGGGCAAATATTGCAGCAGGAGAATCTAAGCTCAAGTCTTTGATAATAAGTGCAAGTTCCAAGAGACTTGATGCTTTCCATGGAGATCTTGATTGTGGAAACATGATAAGCCCTGATTACATCTCAAACACAAGCATCCTCTGTGGTCAAATCGCATATACATTAAACAGCTTGTCAAGCAGAATAGTTAGTATTGAGCAGAACGATGACTACAAAGATGATAATGATGAAGCCTTCAAATACATTGTGAAGAACAATGGATTGGCTAGCGAAGCAGATTACTCACATCATGGAACTGATGATGCTTGTGACAGTGAGAAGTGCAGCCAACAGCGAAGAATACTAGAATTTGTGGCCAAGCAGCACGTATTATTTGCAATTGCTATTAATGGTGGCTTTCAGTTTTACGGTGCAGTCATATATGAAGGGCTAAGTGGGGATTCACTCAATCTTGAGATGAATGTGAAGCCAATTAATAGAGTTCTGAAGGTGACTAGGCTTGTTATGCATTGGTCTTATCGTATTGCTTGA 1770 0.4198 MPNSSSSSSSSSIWAVSSKKLQFFTRIRRFLQSKSSRKRNDASDHLGIVKAKADNNEKVEKLEVVQVVQKQSESSEEEESVITLQRSVKKLHFGNWEEKEVAAKAIEILAKQDVKARKLITELGVVPVLVSMAVSDVASRRRSSVKALIQLANGSFTNKAMIVEAGILSKLPKRIDLVDESTRSEFSELLLSLSSLANTQFPFTSLEFLPFLRDILQSNSSFDTKNSCLGALYNLSTVLENGGPLVSSGIVPILLELSSVKEVSEKALANLGNLVVTLMGKKAIEHSPMVPESLIEILSWEDKPKCQEISAYVLMILAHQSSSQREKMAKAGIVQVLLEVALLGSTLAQKRALKLLQWFKDERQVKMGPHSGPQTSRTAMGSPVNQMEAKEGKRMMKSLVKQSLHRNMEIITERANIAAGESKLKSLIISASSKRLDAFHGDLDCGNMISPDYISNTSILCGQIAYTLNSLSSRIVSIEQNDDYKDDNDEAFKYIVKNNGLASEADYSHHGTDDACDSEKCSQQRRILEFVAKQHVLFAIAINGGFQFYGAVIYEGLSGDSLNLEMNVKPINRVLKVTRLVMHWSYRIA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1081 589 SUPERFAMILY ARM repeat 88 358 IPR016024 -
Dere10g1081 589 SUPERFAMILY Cysteine proteinases 486 559 IPR038765 -
Dere10g1081 589 Gene3D - 7 380 IPR011989 -
Dere10g1081 589 Gene3D Cysteine proteinases 468 568 - -
Dere10g1081 589 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1081 Dere-ChrDere10 20117883 20122259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1081 97 385 U-box Gene Family AT1G67530 29.801 6.31e-17 82.8