Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1038 ATGGATTATCTTGACGAAGAGACATCATCGAAAGGTCCCGTAGCTCAGTTGACACTTTCCGGCTTCTTCTCTGATCTCTTCGCTTCAAGAATGGGTTCAGGCAATTGGTTTAAGACACTGATTTGCTTAAGAAAATCAAAAGAAGGTAGTTCAAATAAAGCGAAGGGATCTATAGCTTCAGGGAAAGCAAGTGCATTGGAGTCGAAGAATTATAGAGGAAAAGTGTTTAGTGGTACAGAAAATAATATGAAAAGAGGAAGTCTTGTGTTACCCGGGGTCTCAGTTGAAACTATTGCAGCAACAAGAATCCAGACAGCATATCGGGCTTACAAGGCTAGAAAATCTTTACGTCGTTTAAAAGGGTTCGCAAAATTAAAGATCATAACTCAAGGTTATTCTGTTAAGAAGCAAGCCGATACAACTTTAACTTACATTCATGCATGGAGCAAGATACAGGGCGAGATTAGAGTTCGCCGAATCTGTATGGTGACAGAAGACAGGATTAGACGGAGGAAATTGGAGTCTCAGCAAAAACTTGAGGCGAAGCTCCATGATCTGGAGGTTGAATGGTGTGGTGGTTCTGAAACCATGGAGGAGATCCTTGCAAGGATACATCAAAGAGAAGAAGCAGCAGTAAAACGAGAAAGAGCTATGGCTTATGCCTTTTCTCATCAGTGGAGATCTAATGCTAGTCAGAGCCAAGGGCTGGGTAATTATGAACTTAACAAAGCTAACTGGGGATGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGTCGCATCACTGACATGTCTTCCAAGAAAGCACAAACTAAGCAATCTAGCAAGGTCTGCAAGGACAAGACCTCATCAACAACTAAAAACCCTGTTTCAATTAAACCAACAATGGCTAATCCAAGAGCTAGGAGATTGTCTTTCTCAGCCACAGAAAAAACTGTGGTGCATGAAGGAGAGCAATAA 969 0.4241 MDYLDEETSSKGPVAQLTLSGFFSDLFASRMGSGNWFKTLICLRKSKEGSSNKAKGSIASGKASALESKNYRGKVFSGTENNMKRGSLVLPGVSVETIAATRIQTAYRAYKARKSLRRLKGFAKLKIITQGYSVKKQADTTLTYIHAWSKIQGEIRVRRICMVTEDRIRRRKLESQQKLEAKLHDLEVEWCGGSETMEEILARIHQREEAAVKRERAMAYAFSHQWRSNASQSQGLGNYELNKANWGWSWKERWIAARPWESRITDMSSKKAQTKQSSKVCKDKTSSTTKNPVSIKPTMANPRARRLSFSATEKTVVHEGEQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1038 322 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Dere10g1038 322 MobiDBLite consensus disorder prediction 266 322 - -
Dere10g1038 322 Coils Coil 169 189 - -
Dere10g1038 322 PANTHER IQ-DOMAIN 5-RELATED 31 292 - -
Dere10g1038 322 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Dere10g1038 322 MobiDBLite consensus disorder prediction 266 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1038 Dere-ChrDere10 19301228 19306524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1038 31 309 IQD Protein Family AT2G33990 53.381 1.43e-87 261