Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1036 ATGAATACAGATCGAAACCTTTTGCTTCTTTTTCCTTTGTTCATTTCAGTTCTCCTTTTCCATTGCCATGTAAGAGCTGCAGCTGCTAACAGTTATGGAACTACTGATGTTGGTGCAATTATTGATCTCGGTTCTGAAACAGGAAAGCAACAGAGAAGAGCCATGGAAGTTGCAGCTCAAAGTTTCAATAACTATTCAAAGACTCACAACATATCCCTCCATTTCAGAGACTCTGGTAGAAACCCATTACAAGCAGCTTCTGCTGCGGAGGAGCTAATAAATAAGACGAAAGTGAAAGTCATCGTTGGGATGGAGACATGGCAGGAAGCATCTATTGTAGCAGACCTTGGAGATAAAGCTCAAGTTCCAGTTATTTCATTCTCTTCTCCCTCAATAACTCCATCACTATCATCAACGCCACTTCGTTGGCCTTTCTTGATTCAAATGGCTAAGAACCAGACCGCTAATATGAACTGTATAGCCGACATTGTTCATGCATATAACTGGCAAAAGGTTATAGTTATATATGAAGACGACCCATATAGTAGTGATTCAAGCATGTTAACCCTCCTTTCTGAGGCTCTCTTGAACATTAATTCCCAGATTGAACACAGACTAGTGCTTCCTCCATTTTCCTCTTTATCTGATCCAAAAGGGGTTGTTCTTGATGAACTACTGAAGCTATTATCTGCACAATCTAGGGTTTTTATAGTTCTCAAAGCATCATTGCCTATGGTGACCCATTTGTTCAGAGAAGCTAAGAAAGTAGGATTCTTGGGGAAAGAATCAGCTTGGATTATCAATGAGGAGATTGCTGGTATGCTGGAGTCTGTTGATGGCTCAGTTTTATCCTCCATGGAAGGTACTATTGGAATCAAAAGCTACTATTCTACAAGTTCTAGTGCTTACACTCAGTTCAAAGAAAAATTCCAAAATACATCTAAACCTGGATCTTATGCACTGCAAGCTTATGATAGCATCACAATCGTCGCAAAGGCCCTAGAGAAAATAAATGGCACTGACCCTATTAACTCAAGGGTGTTCTTGAAGAAAATGCTGTCCTGCAATTTTACTGGCTTAAGTGGGAATATCAGGTTCAAAGAAAATCATTTATCATACACTCCAGTGTTAAGAGTCATAAACGTGGTTTACAAGAAATACACCGAATTGGACTTTTGGATCCCAGATTTGAAGTTCTTTAAATCTCTGAAAGACATAAAGAACGAAAGTGATGCTGCTTCAACAGCTTTAAGGGGTCCTGTGGTTTGGCCTGGAGACCTAAAGAAGGATCATCCAAATGGATGGAATATACCTTCTGAAGATAATCCCTTAAAAGTAGCCGTTCCTATAAATCCAGCTTTTGAAAATTTTGTGAAGGAAGAGTCTCCAGGGAAATATGTTGGTCTGTGTATTGAGCTTTTCCAAAAGGTGCAAGAAAAGCTCAGAGATAAGTACTCTGGCCTGCCATATAAATTTTTCCCCTTCAATATATCCTATGATGATCTTCTGAAAAATGTCGCGAACCAGACCTATGATGCTATCGTTGGAGATGTAACCATACTTGCGGATCGATCAAAGACTGTGTCATTCACTCAGCCATACACAGAGTCAGGTCTGTCACTCATACTTCCTGCAGAGACAGAAGGGACGACATGGCTGTTCATGAAGCCATTTAGCTGGGAAATGTGGGTGGCCACTGGTGCCATCCTCATCTACACAATGCTCACCATCTGGTTCCTCGAGCATCCATTAAACCCCGAGTTCAAAGGACCCTGGAAAAACCAACTCAGCAACACGATTTGGTTTGCTTTATCTTCTCTATTCTTTGCTCACAGAGAGAAAGTGTACAGCAACTCCGCAAGAGTGGTAGTTGGGGTATGGCTATTTCTGGTCTTTATTCTAACCTCAAGCTACACTGCAAGTCTATCTTCTATGCTCACTGTCAAACGCATGAATTCTGGGAGAGACATTGAGTGGCTAAAGAAAAATGACTTGCGAGTTGGTTGTGATGATGCCAGTGAATTTGTCAAGAACTACTTGCTGAATGTGTATGAAATCCCTGAGAAACAGATCGTAAGGCTTAGTGGGGAACGTGAATTTGTGGACAAGTTTAAGAGCAAAGAAATCTCTGCTCTCTTCCTTGAGAGCCCATATGAGAAGGTTTTCTTGAACAAGTACTGCAATGATTACACTGCAACTTCTTTTGGCTATAAATTTGGAGGCCTCGGCTTTGCATTCAAGAGAGGGTCTCCCATGGTGAAAGACTTTTCTGAAGGCATCTTAGAGCTAGCAGAAAATGGAACTCTGAAGAGGCTGGAAGATTATTGGTTGACCCCTATCAATGAATGCTCAAGCAACTCAACGTCCACCGGAACTGAGAGCCTGACCATCGGAGACTTTTGGATTCTCTATGTTATGTCTGGCGTTACTTCCTCCATGTGCTTGCTCCTTTCTGTGTTGAGGAATTACCATCACACTCATCGAGGGAGAGGTCAAGGCAATGACATTGCTGCTGATAATGGTGTTTGGAACGAGGCACTGAGACTCACTGCAGATCTTTACAATGGCCGTTTCAAGTTCAATACTTTAGGAAGAGCTGCAACTTTTGGTGCACCTCAAACTGTACACCATTGGAATTCCTCGAGGTGGGAGAGTGTGAGCACTTCTGATGATCATGTTAATCCTCGACGCACCAGATCAGTTGAGTTAGAAATGATATAG 2721 0.4179 MNTDRNLLLLFPLFISVLLFHCHVRAAAANSYGTTDVGAIIDLGSETGKQQRRAMEVAAQSFNNYSKTHNISLHFRDSGRNPLQAASAAEELINKTKVKVIVGMETWQEASIVADLGDKAQVPVISFSSPSITPSLSSTPLRWPFLIQMAKNQTANMNCIADIVHAYNWQKVIVIYEDDPYSSDSSMLTLLSEALLNINSQIEHRLVLPPFSSLSDPKGVVLDELLKLLSAQSRVFIVLKASLPMVTHLFREAKKVGFLGKESAWIINEEIAGMLESVDGSVLSSMEGTIGIKSYYSTSSSAYTQFKEKFQNTSKPGSYALQAYDSITIVAKALEKINGTDPINSRVFLKKMLSCNFTGLSGNIRFKENHLSYTPVLRVINVVYKKYTELDFWIPDLKFFKSLKDIKNESDAASTALRGPVVWPGDLKKDHPNGWNIPSEDNPLKVAVPINPAFENFVKEESPGKYVGLCIELFQKVQEKLRDKYSGLPYKFFPFNISYDDLLKNVANQTYDAIVGDVTILADRSKTVSFTQPYTESGLSLILPAETEGTTWLFMKPFSWEMWVATGAILIYTMLTIWFLEHPLNPEFKGPWKNQLSNTIWFALSSLFFAHREKVYSNSARVVVGVWLFLVFILTSSYTASLSSMLTVKRMNSGRDIEWLKKNDLRVGCDDASEFVKNYLLNVYEIPEKQIVRLSGEREFVDKFKSKEISALFLESPYEKVFLNKYCNDYTATSFGYKFGGLGFAFKRGSPMVKDFSEGILELAENGTLKRLEDYWLTPINECSSNSTSTGTESLTIGDFWILYVMSGVTSSMCLLLSVLRNYHHTHRGRGQGNDIAADNGVWNEALRLTADLYNGRFKFNTLGRAATFGAPQTVHHWNSSRWESVSTSDDHVNPRRTRSVELEMI 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1036 906 Gene3D - 552 675 - -
Dere10g1036 906 Gene3D - 740 776 - -
Dere10g1036 906 Pfam Receptor family ligand binding region 52 382 IPR001828 -
Dere10g1036 906 FunFam Glutamate receptor 551 681 - -
Dere10g1036 906 SUPERFAMILY Periplasmic binding protein-like II 432 778 - -
Dere10g1036 906 PIRSF IGluLR_plant 5 855 IPR017103 -
Dere10g1036 906 Gene3D - 152 389 - -
Dere10g1036 906 Pfam Bacterial extracellular solute-binding proteins, family 3 451 778 IPR001638 -
Dere10g1036 906 Gene3D - 690 739 - -
Dere10g1036 906 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 842 IPR015683 -
Dere10g1036 906 Pfam Ligand-gated ion channel 779 809 IPR001320 GO:0015276|GO:0016020
Dere10g1036 906 Gene3D - 439 551 - -
Dere10g1036 906 FunFam Glutamate receptor 156 318 - -
Dere10g1036 906 CDD PBP1_GABAb_receptor_plant 36 403 IPR044440 -
Dere10g1036 906 SMART GluR_14 445 779 IPR001320 GO:0015276|GO:0016020
Dere10g1036 906 Gene3D - 43 374 - -
Dere10g1036 906 SUPERFAMILY Periplasmic binding protein-like I 33 395 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1036 Dere-ChrDere10 19278777 19282249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1036 3 827 Ion Channels AT2G29120 31.844 1.32e-130 414