Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1035 ATGGATCGAGGCAAAGATTCTGAAGCCAAAATGAATATCTCTTTCCCTATTCCTAAAGCACTTCAAAGATTCTGGCTATTATCCTTTTTGCTCTTCTCCTTTGGTCTCTTCCATAGCCATGGAGATGAGGCTATAATAGAAGACAGTAAAGTTATACGTATTGGTGCAATTATTGATGTTAACTCCCGTATAGGTAAAGAACAGCAAATAGCCATGGAAATTGAAGCTCAAAATTACAATAACACATCGAAGACCCATAAGCTGGCTCTCCATTTCAAGAACACCACTAAGGAGCTCTTAAAAGCCACCTCTCTTGTTGAAGAGTTAATTGAAGTGCAGAAAGTGGATGTAATTATAGGGATGCATACATGGCAAGAAACAGTTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCGATCATATCCTTTGCATCACCTGCAATTACCCCACCATTGACACAAAAACGCTGGCCTTCTCTGGTAAGACTAGCTAACAATGTCACTGCACATGTAAAGTGTATTGCAGATATAGTGCATGCTTTTAGTTGGCAAAGAGTAGTAGCCATTTATGAAGATGACGGCTATGGAGGTGGAGACTATGGGATGCTATCACTCCTTTCTGAGGCCCTCCAAGACTTCGGTTCTATAATTGAGTATCGGTTATCCCTTCCACCGATTTCTTTTCTGTCTGATCCAGGAGGGCTAATTCATGAAGAGCTGATTAAGTTGATAGAGCAAACTCAATCTCGGGTTTTCATTGTTTTGCACTCATCCCCAGATATGGTGACTCATTTGTTCAGAGAAGCTTCACAGGTGGGACTGGTGGGTGGAGATTCAGCTTGGATAATCCCAGAGAGCATTACTAATCAGCTTGACTCTGTAAACAAGTCTGTTATTTCCTCCTATATGGAAGGATCTTTAGGAATCAAGACACACTACTCGGAATTTAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAGTTTTCGCGCCAAGAATCCTGAAGAAGATAATAGCAACCCAGGATTTTATGCATTGCAAGCATATGATAGCATCAAAGTTGTCATTCAAGCACTAGAAAGAATGGCTAGTGACAATAGTATCAGCCCAAGGGCTTTACTAAGAGAAATACAGTCCAGCAATTTCCATGGTTTAAGTGGGGAAATTCATTTTGAAGCAGGAAAGCTCTTGCAGAATCCTATCCTAAGGATAGTAAACGTAGTTGGGAAAAGTTACAAGGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACTACAACCCTGCCTACAGCAAAACGTGAGAGAAATGCCATTGCTAACAGACAAAGTTTGGCTGGTGTAGTACAATGGCCTGGGAATTTGCAGAGGATCCCAAAAGGCTGGAATATGCCCATTAAGCAAAAGCCAATGAGAATTGCAATTCCAGGAAGAACTTCATTTTCCAAGTTTGTGAAGGTTGACTATGGAGAGAATCCAGCTCAGAATCAATATAATGGATTCTGCATTGACATTTTTAAAATGGTGCTTGGACTTTTGGAATATGAATTGCCCTATGAGTTTTATCCCCTCAATGCAACTTATCCAGATCTGGTTCAACTTGTGTATAACAAGACCTACGATGCAGTGGTTGGCGACATGACCATACTAGCAGAGAGATTGCAGTTTGTGGACTTTACTGTGCCATATGCAGAATCAGGATTGTCCATGATAGTTCCAGAAAAGTATAAAGAGTCAACATGGATGTTCCTGAAGCCATTCACCTTGCAAATGTGGGTGGTCAGTGGTGCCATCATGGTTTACACAATGATAGTAGTTTGGTACTTGGAGCGAGTACCCAATCCTGAGTTTCATGGCAGTTGGAAGAGCCAAATTAGCACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTTGCTCATAGGGAGAAAATGCATAGCAACTTATCTCGAGTGGTGATGGCAGCATGGCTCTTTCTTGTTATGGTTCTGAACTCAAGCTACACTGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCGGCCAAATGTGACAAGCATTGAGTGGCTGAAGATGAACAACGTGAAAGTTGGTTGTGATGGTGACTCATTTATTAGGACATACCTAGAGAACGTCGTAAGGTTCAGGCCAGAAAACATCATCAACATAAATAGTGAATACTTCTATGATAGCGAATTCAAAAACAACTCCATAGCTGCTGCCTTTCTTGAACTCCCATATGAAAAAGCATACATCAGTAAATACTGCAAGGGATACTCTAGCTCCCCACCCACCACCAGATATGGAGGACAAGGTTTTATGTTCCAGAAAGGCTCCCCAGTGGCCAAAGATGTTTCTAAAGCTATATTGCTGCTGTCAGAGGGGGGAGAATTGAAGAACTTGGAAGCAAAATGGTTTAATCCCTCGGACGAGTGCTCCGGCAGCACAAACTCCAATGGTACCCGAAGTTTGAAGTTGGAAAGTTTCTGGGTTCTCTATGTAATTTCTGGGGTCACATCTACTATTTGTTTACTATTTTCTATCGTCCCCTCACTTCGCTTTTGTCAGCGTCTTCAGAATGTGGCTCATGGAGGCAATGGACCCACAAGTGATGCAAGAATTTGGATAAGTGCTCTTGAAATAGCTAAACAGATTTATAGCAGAAAGCATACTCAGGCAACTCATTTTTCTGGACCCACAATTGAGGCACAACAACATGTGAATGATCGTTATTCCTGGTGGGACTATAACAGCACTATTGATCCTGGGCATCGGCAGGATACTGCATCCCCAGCACCATCAATCATTGTGGTCAATTCTCCACCACCAGAGATACACATGGAAACTCCTGATAATAGATGA 2868 0.4188 MDRGKDSEAKMNISFPIPKALQRFWLLSFLLFSFGLFHSHGDEAIIEDSKVIRIGAIIDVNSRIGKEQQIAMEIEAQNYNNTSKTHKLALHFKNTTKELLKATSLVEELIEVQKVDVIIGMHTWQETVLVAEVGSQAQVPIISFASPAITPPLTQKRWPSLVRLANNVTAHVKCIADIVHAFSWQRVVAIYEDDGYGGGDYGMLSLLSEALQDFGSIIEYRLSLPPISFLSDPGGLIHEELIKLIEQTQSRVFIVLHSSPDMVTHLFREASQVGLVGGDSAWIIPESITNQLDSVNKSVISSYMEGSLGIKTHYSEFSSEYQDFQAQFRKSFRAKNPEEDNSNPGFYALQAYDSIKVVIQALERMASDNSISPRALLREIQSSNFHGLSGEIHFEAGKLLQNPILRIVNVVGKSYKEIDFWTQENGFTTTLPTAKRERNAIANRQSLAGVVQWPGNLQRIPKGWNMPIKQKPMRIAIPGRTSFSKFVKVDYGENPAQNQYNGFCIDIFKMVLGLLEYELPYEFYPLNATYPDLVQLVYNKTYDAVVGDMTILAERLQFVDFTVPYAESGLSMIVPEKYKESTWMFLKPFTLQMWVVSGAIMVYTMIVVWYLERVPNPEFHGSWKSQISTALWFTFSSLFFAHREKMHSNLSRVVMAAWLFLVMVLNSSYTASLSSMLTVQQLRPNVTSIEWLKMNNVKVGCDGDSFIRTYLENVVRFRPENIININSEYFYDSEFKNNSIAAAFLELPYEKAYISKYCKGYSSSPPTTRYGGQGFMFQKGSPVAKDVSKAILLLSEGGELKNLEAKWFNPSDECSGSTNSNGTRSLKLESFWVLYVISGVTSTICLLFSIVPSLRFCQRLQNVAHGGNGPTSDARIWISALEIAKQIYSRKHTQATHFSGPTIEAQQHVNDRYSWWDYNSTIDPGHRQDTASPAPSIIVVNSPPPEIHMETPDNR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1035 955 Gene3D - 473 581 - -
Dere10g1035 955 SMART GluR_14 474 810 IPR001320 GO:0015276|GO:0016020
Dere10g1035 955 CDD PBP1_GABAb_receptor_plant 53 431 IPR044440 -
Dere10g1035 955 Gene3D - 173 342 - -
Dere10g1035 955 FunFam Glutamate receptor 171 342 - -
Dere10g1035 955 Gene3D - 727 812 - -
Dere10g1035 955 Pfam Receptor family ligand binding region 75 411 IPR001828 -
Dere10g1035 955 CDD GluR_Plant 471 808 - -
Dere10g1035 955 Gene3D - 582 724 - -
Dere10g1035 955 Pfam Ligand-gated ion channel 810 840 IPR001320 GO:0015276|GO:0016020
Dere10g1035 955 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 53 872 IPR015683 -
Dere10g1035 955 SUPERFAMILY Periplasmic binding protein-like II 447 809 - -
Dere10g1035 955 FunFam Glutamate receptor 582 720 - -
Dere10g1035 955 SUPERFAMILY Periplasmic binding protein-like I 50 464 IPR028082 -
Dere10g1035 955 Gene3D - 362 472 - -
Dere10g1035 955 Pfam Bacterial extracellular solute-binding proteins, family 3 497 809 IPR001638 -
Dere10g1035 955 Gene3D - 47 172 - -
Dere10g1035 955 PIRSF IGluLR_plant 19 932 IPR017103 -
Dere10g1035 955 FunFam Glutamate receptor 468 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1035 Dere-ChrDere10 19266765 19273397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1035 18 847 Ion Channels AT2G29120 33.178 9.58e-144 450