Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1029 ATGTCTCTCTCTTCTTCCTCGCCTTCACCTTCTTCTTCGTTTCTATTCACTTGTTTGTTTGTTTTCTCCATTTTGACACAGCCTGAACCTTCATTTTGCGCAGCCAAACTAGCCAAAGCCAACTCCTCTCGTCCCCATCGCCAGCTCGCAGTCGATTACTACTCCAAATCTTGCCCTCAATTAGAGCAGCTCGTTGGCTCAGTCACCTCCCAACAGTTCAAAGAGTCCCCTGTTTCTGCCCCTGCCACCATTCGCCTCTTCTTCCATGATTGCTTCGTCGAGGGCTGTGATGCATCGATTTTGGTGGCATCGAGGCCAGGAAGCAGAGAGATGGCAGAGAAGGACGCAGTGGAAAACAGAGAGCTCAGGGGAGAGGGGTTTGAGAGCGTAAGGAAGGCGAAGGCAGTGGTAGAGAGCAAGTGCCCAGGAGTAGTGTCGTGTGCAGACATTCTTGCAATCGCAGCCAGAGATTATGTGCATCTGGCAGGAGGACCCTATTACCAAGTGAAGAAGGGTCGGTGGGATGGGAAAATATCAAAGGCCTCAAGGGTGGGACCCAACATTCCTCATGCAAACTCCACCGTTGATCAACTCATCAATCTCTTCACCTCCAATGGCTTAACGATACAGGACATGGTCGCTCTCTCGGGTGCCCACACAATCGGGTTCGCCCATTGCGCCCACTTCGTTACCCGCCTCTACAACTACGGGGGCATGGGCCGACCCGACCCGAGCATGGACCCGAAGCTCCTCTACTCACTGAGGATGTATTGCCCTAGCTATGGCGGAAACTCTGGCGTTGCAGTCCCTTTCGATGCCACCACTCCGTTCCTTTTTGATCATGCCTACTATGGGAACTTGCAGAGCAAGATGGGTTTGTTAGCGTCGGATCAGGCTCTGTTCTTGGACCCGAGAACGAAGCCTCTGGTTCAGATGTTTGCGAAGGATAAGCAGAAGTTTTTCCAGGCTTTTGCGAGTGCCATGGAGAGAATGAGTTTGGTGAAAGTGAAGAGAGGGAGGAAGCATGGAGAGAAGAGGAGGGACTGTAGTGTACATAGTACGTAA 1065 0.5192 MSLSSSSPSPSSSFLFTCLFVFSILTQPEPSFCAAKLAKANSSRPHRQLAVDYYSKSCPQLEQLVGSVTSQQFKESPVSAPATIRLFFHDCFVEGCDASILVASRPGSREMAEKDAVENRELRGEGFESVRKAKAVVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISKASRVGPNIPHANSTVDQLINLFTSNGLTIQDMVALSGAHTIGFAHCAHFVTRLYNYGGMGRPDPSMDPKLLYSLRMYCPSYGGNSGVAVPFDATTPFLFDHAYYGNLQSKMGLLASDQALFLDPRTKPLVQMFAKDKQKFFQAFASAMERMSLVKVKRGRKHGEKRRDCSVHST 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1029 354 ProSiteProfiles Plant heme peroxidase family profile. 48 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PANTHER - 40 351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 CDD secretory_peroxidase 48 351 IPR033905 GO:0004601|GO:0042744
Dere10g1029 354 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Haem peroxidase superfamily signature 145 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Haem peroxidase superfamily signature 163 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Haem peroxidase superfamily signature 272 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 ProSitePatterns Peroxidases active site signature. 80 91 IPR019794 GO:0004601
Dere10g1029 354 Gene3D - 52 351 - -
Dere10g1029 354 Pfam Peroxidase 68 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 FunFam Peroxidase 189 331 - -
Dere10g1029 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Dere10g1029 354 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 144 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 270 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 286 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 SUPERFAMILY Heme-dependent peroxidases 48 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere10g1029 354 FunFam Peroxidase 52 199 - -
Dere10g1029 354 Gene3D Peroxidase, domain 2 189 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1029 Dere-ChrDere10 19201293 19205488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1029 12 351 Peroxidase AT2G34060 63.636 2.10e-166 466