Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1027 ATGGAAACCGATCATGAAACGCGTTCTTTGCTTTCTGTTATGCAGCTTTTCATTCTTTGCCTGTTGTGTTTCATGGCAAAAGTAGTTGAATCTTCAAGTGAGAACGTCTCAGTCTCAGCTTTTTACGTGTTTGGGGATTCCACAGTAGACCCAGGGAACAATGATTACATTAAAACAGCTTTGAAGAGCAATTTTCCTCCTTATGGTAGAGATTTTCCCAACCACGAGGCCACAGGAAGGTTCACCAATGGAAAGCTCGCCACTGATTACATTGCTTCATATGCAGGTCTGAAGAAGGACTCTCTGTCACCTTATTTGGACCCAAAGCTTAATAGCATGGAGGAGCTTCTGACGGGAGTTAGTTTTGCTTCTGCTGGTTCTGGGTTTGATCCGTTAACGCCAACTCTCACTAATGTGATTGCAATACCAAAGCAGTTGGAATATTTTAGAGAATACAAAAGGAGATTGGAGGGTGTGCTTGGGAAGGAAAGAACTGAGATCCATATTCAGAAGGCTGCATTTCTGATCAGTGCTGGTACAAATGACTTCGTGGTAAATTATTTTTCTGTACCACTACAGAGAAAAAGCTACACTCCCTTCACCTACCAGCAGTTCTTGATTCAAAATGTCAAAGACTTCGTACAGGATCTGTGGAAGGAAGGTGCTCGGGAGATTGCGGTGGTTGGGCTACCTCCGATGGGATGCTTGCCCATAATGATCACTATGAACTCCGATAACAGCTTTGAGGAGAGAGGCTGCATCGATAAGTACTCCTCAATTGCAAGAGATTACAACCTAATGCTTCAACATGAATTACAGTTAATGCATCTCAATTTGTCTAATCCTGGTGCTAACATCTATTACGTTGATATATATGGACCCCTGGCTGATATGATCCACAATCATAAAAAATACGGGTTTGATGAGGTTGATCGAGGTTGCTGTGGAAGTGGGTTCATCGAAGCATCGTTATTGTGTGACGACATTTCAGAAGTGTGTTCTGATCCATCCAAGTATGTATTCTGGGATTCAATACACCCAACAGAAAAGGCTTATCACAACCTCTTCCTGGCAGCTCGTTCCACCATTGACTTCATCATCAACGACATTCAACAGAAAAGGAATACCACAGCCTCTTCCTGGCAGCTTGTTCCACCAGCGTTTTCATCGTCATCGACTAGGATCAATTCATATGCATTATGTTTGTTGCTTTTCCTCCTTCTTGTTTATGGCCTGCAATAG 1242 0.4275 METDHETRSLLSVMQLFILCLLCFMAKVVESSSENVSVSAFYVFGDSTVDPGNNDYIKTALKSNFPPYGRDFPNHEATGRFTNGKLATDYIASYAGLKKDSLSPYLDPKLNSMEELLTGVSFASAGSGFDPLTPTLTNVIAIPKQLEYFREYKRRLEGVLGKERTEIHIQKAAFLISAGTNDFVVNYFSVPLQRKSYTPFTYQQFLIQNVKDFVQDLWKEGAREIAVVGLPPMGCLPIMITMNSDNSFEERGCIDKYSSIARDYNLMLQHELQLMHLNLSNPGANIYYVDIYGPLADMIHNHKKYGFDEVDRGCCGSGFIEASLLCDDISEVCSDPSKYVFWDSIHPTEKAYHNLFLAARSTIDFIINDIQQKRNTTASSWQLVPPAFSSSSTRINSYALCLLLFLLLVYGLQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1027 413 SUPERFAMILY SGNH hydrolase 172 355 - -
Dere10g1027 413 CDD SGNH_plant_lipase_like 40 353 IPR035669 -
Dere10g1027 413 Gene3D SGNH hydrolase 27 365 IPR036514 -
Dere10g1027 413 Pfam GDSL-like Lipase/Acylhydrolase 42 356 IPR001087 GO:0016788
Dere10g1027 413 PANTHER GDSL ESTERASE/LIPASE EXL3 23 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1027 Dere-ChrDere10 19191267 19195687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1027 19 355 Pollen Coat Proteome AT1G75910 35.735 4.65e-65 210