Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1026 ATGGAAGCCTCTGACAAACACCCATTACTTGTTCTTACACAGATATTCACTCTTTGCTTCTTATGTTTTATGAGCGAAAAAGGCGAAGCTTTAAACCAGAAGGTCTCTGCCATATATGTCTTTGGAGACTCCACAGTAGACCCAGGAAACAATAACTACATAGCCACAACTTTCAAGAGCAATTTTCGTCCCTATGGTAGAGATTTCGCCAATCAAGTCCCCACAGGAAGATTCACTAATGGCAAGCTTGGCACTGACTTTTTGGCGTCATATTTGGGTGTGAAAGAGTTAGTACCTCCATACTTGGATTCAAGTCTGAGCGACGAGGATCTTCTTACAGGAGTTAGTTTTGCCTCTGCTGGTTCTGGTTTCGATCCACTGACACCAACTCTAGCAAACGTGATACCAATACCAGTGCAATTGGAATATTTCAAAGAATGCAAGAAGAGGCTGGAGAGCGTGCTGGGGAAGCAAGGAACAAAGACTCATTTGAAGAAGGCTGTAATATTCATAGGTGCAGGAACAAACGACTTCTTAGTAAACTATTTCACAGTGCCAGTACGAAGAAAGAGCTTCAACCTCTTAGCCTATCAGCATTTCGTGCTCCAGAATGCGAAAGATTTCATACAGGGTTTATGGGCAGAAGGGGCAAGAAAATTTCTGGTGGCAGGGCTGCCTCCGATAGGATGCTTGCCGATAATGATAACCTTCAACTCCAATGATGCCTTTAACCAACGAGGTTGTCTGGACAAGTTTTCCTCTGTGGCCAGAGACTACAACCTTCTTCTTCAACATCAACTCAACTTGCTGCAACACAACTTGTCCATTTCTGGTGCTAAGTTCTCCTACGTCGACATTTATGCACCCGTGGACGACATGATTAAACAACATGACGCTTTTGGGTTTGAAGAGGTTGATAGTGGGTGTTGTGGAACTGGGTACGTAGAAGCAGCATTTCTGTGCAATAAACTTTCGGATGTATGTCCTGATTCATCCAAGTACGTATTTTGGGATTCAATACACCCAACGGAGAAAGTATACTTCAACGTCTTCAACGCTGCTCGTCCCACAGTTGATGCTCTTATCAATGCCTAG 1095 0.4374 MEASDKHPLLVLTQIFTLCFLCFMSEKGEALNQKVSAIYVFGDSTVDPGNNNYIATTFKSNFRPYGRDFANQVPTGRFTNGKLGTDFLASYLGVKELVPPYLDSSLSDEDLLTGVSFASAGSGFDPLTPTLANVIPIPVQLEYFKECKKRLESVLGKQGTKTHLKKAVIFIGAGTNDFLVNYFTVPVRRKSFNLLAYQHFVLQNAKDFIQGLWAEGARKFLVAGLPPIGCLPIMITFNSNDAFNQRGCLDKFSSVARDYNLLLQHQLNLLQHNLSISGAKFSYVDIYAPVDDMIKQHDAFGFEEVDSGCCGTGYVEAAFLCNKLSDVCPDSSKYVFWDSIHPTEKVYFNVFNAARPTVDALINA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1026 364 Pfam GDSL-like Lipase/Acylhydrolase 38 352 IPR001087 GO:0016788
Dere10g1026 364 Gene3D SGNH hydrolase 25 360 IPR036514 -
Dere10g1026 364 SUPERFAMILY SGNH hydrolase 164 357 - -
Dere10g1026 364 PANTHER GDSL ESTERASE/LIPASE EXL3 20 348 - -
Dere10g1026 364 FunFam GDSL esterase/lipase APG 27 355 - -
Dere10g1026 364 CDD SGNH_plant_lipase_like 37 353 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1026 Dere-ChrDere10 19182918 19186551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1026 12 350 Pollen Coat Proteome AT1G75910 35.569 6.38e-62 200