Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1020 ATGGTGAACCCTCCGAGAGACGAGATACGAAAGATCAGAGCACAACTTCAAGAGTATGGTCAAGTGGGTGATGCCAATGTGTTCTATTGGTTCCAAAATCGCAAGTCCAGAAGCAAGCACAAGCTTCGCAACCTCCAAAGCTCCAAGACTAACAATAATAACGAAACAACCCCACAACAAGCACCCCATCAAAACCCTCCTCCTTCTCTCATCCCTCAGATTACCACACCCCCTTCGTCCTCTTCTTCCTCTGACAGGTCATCTCCTCCAAAGGAAATGATGCCCACTTATAAGGCATTCTCCATTGGCTTCTCTTCCGATGTGGTTGTGCCAAATTCTCCCACTGGTTCTGTGAACAACCAGACCCATTTTCAGGCCCATAATGAGACCACTCTGCCTGAGCCTTTCTTCTTCCCGGTGCACCAAAATGGTACTACAACTCAAGGGTTTTGCTTCTCTGAGCTCTCTAACGTGGTTCAAGCTCAGGCTCAACAAAATGTTGGGCCTTGCACTAGTCTCTTGCTTAGTGAGATGATGAACCACCATGTAGCTTTGAAGAAAGAACATGAAAAGGAACAAGAGAAGGACATGAAAATAATGCACCAACAACACCAACTCCCTCATCTTAGTTTCTGTGTCACTTCTTCTACCACTCCCACCATTCACTCTTCTGTCGCTTCAGCCACCGCCACTGTTACTGTTCCATCCCCCATCCCTCAAGTTCAAGGTGCAGGTGAGGCAGCTGGTACGGCGAAGTGTACAGTGTTCATAAACGACGTCGCATTCGAAATGGCTGTGGGTCCCTTCAACGTTCGCGAGGCCTTCGGCGATGATGCGGTTCTTGTCCACGCGTCTGGTCATCCCGTTCTCACTAATGAGTGGGGCCTCACCCTCCAGTCACTCCAGCACGGCGCATTTTATTATCTGGTGCGCATATATAGAATGGAGAAGTTGAAGGAGCTAGATATGGAGTTCTCTCTCTATCGCTATATTCCTATCCTCTTTGTTCTCTCTGTCTCTATATTTTAG 1029 0.4791 MVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQSSKTNNNNETTPQQAPHQNPPPSLIPQITTPPSSSSSSDRSSPPKEMMPTYKAFSIGFSSDVVVPNSPTGSVNNQTHFQAHNETTLPEPFFFPVHQNGTTTQGFCFSELSNVVQAQAQQNVGPCTSLLLSEMMNHHVALKKEHEKEQEKDMKIMHQQHQLPHLSFCVTSSTTPTIHSSVASATATVTVPSPIPQVQGAGEAAGTAKCTVFINDVAFEMAVGPFNVREAFGDDAVLVHASGHPVLTNEWGLTLQSLQHGAFYYLVRIYRMEKLKELDMEFSLYRYIPILFVLSVSIF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1020 342 MobiDBLite consensus disorder prediction 45 60 - -
Dere10g1020 342 MobiDBLite consensus disorder prediction 75 90 - -
Dere10g1020 342 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 311 IPR044557 GO:0003700|GO:0050793
Dere10g1020 342 MobiDBLite consensus disorder prediction 37 94 - -
Dere10g1020 342 Pfam Homeodomain 3 40 IPR001356 GO:0003677
Dere10g1020 342 SUPERFAMILY Homeodomain-like 3 43 IPR009057 -
Dere10g1020 342 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1020 Dere-ChrDere10 19116234 19118093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1020 2 310 Wox Gene Family AT5G45980 33.016 7.80e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere10g1020 Homeodomain 2.5e-06 CL0123