Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1016 ATGGACCAACATAATAAAGCGATTCTTCTGCTTCTTCTTCTGTTCCAAGTTCTCCTTGTAGCAGCACAGAACTCCAATCAAGACTTTACTGCATTATCATCTCTCACTGAATTTTGGGAGAACATACCACCAAGTTGGGTGGGTTCGGATCCATGTGGGAGTGGATGGGAAGGAATTCGTTGCACCAATTCAAGAGTGACCTCAATAATGTTATCAAGCACCACTTTAAAGGGCAGGTTGTCTGGAGATATTCAGTTATTAACTGAATTAGTGACTTTGGACCTCTCTTACAACCAAGACCTGACGGGAACAATTCCAGATGAAATTGGGAATTTGACAAAATTACATACCTTAATATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCTGATTCAATTGGATCTCTTAAGCAGTTGACCTTTCTAGCTCTAAACATGAATCGGTTCAGCGGGAAGATTCCACGTACACTTGGCAATCTAGCCAATATTGATTGGCTAGATATTGCAGATAACCAGCTTGAAGGTTCTATCCCTGTCTCTGATGGTGAAGGAACTGGTCTTGACATGCTACTCAAAGCACAACACTTTCATTTTGGGAACAACAGGCTCTCGGGTGAAGTTCCAGCTCAGCTTTTCAGCTCAAACATGAAATTGAAACACCTGCTTTTTGACAGCAATCGGTTGAATGGCGGCATTCCGGACACCGTTGGAGTAGTGAAAGCGTTGGAGGTGGTACGCTTTGATAGGAATCAAATGAGTGGGGAGGTGCCTTCAAGCATCACCAATATCACAAAACTCAGTGAGCTGTATTTATCCAACAATAAGCTGTCTGGATCTATGCCTGATCTTTCCCCATTGAGTCAACTCACCTATGTGGATTTGAGTAACAATACTTTCAATTCTTCCAGTATTCCTTCATGGGCTTCAAGTTTGCCATTTTTGACTACAATAAAGTTAGAGAACACGGGACTTCAAGGGGAAGTACCTGTCTCCATATTTAACCAGTCTAATATAGAGACTGTGGTAATGAGCAACAATGAGCTCAATGGCACCTTGGATATTGGCAATGCCTACAGCGACCATCTGGAGCTTATTGATTTAAAGAATAATAAATTAACCACCTTCGCTCAGAGCAATGCAAATATCCAAATCACAATCTTACTAAATGGCAACTCCATGTGTCTTGAATCGGGAGTTAGTTCGGAAAGTTACTGCAAAGATTCTGAATCTGTTGTCACATATTCAACACCAACAAATAGTTGTACATCTTTTCGTTGCAGTTCTGACCTGGTTTCTAGCCCAAACTGTAAATGTGCACATCCTTATATTGGAGTTCTGTTTTCTAGAGCTCTCAGTTTCTCAAACTTAGGAAACACAAGTTACTACAAGATTCTTGAGCAGTCCCTCATGACTACATTTCAGCAACAAAACCTTCCAGTGGATTCAGTTTCTCTGAGCAATCCATTCAGGAATTCTTCTACTGATTACTTTCAATTGGACATCAAAGTCTTCCCATCTCAAAATGATCGTTTCAATAGAACTGGAGTCTCAAGTATTGCTTTTGTGCTTGCCAACCAGATTTTTGAGGCCCCAGAATTTTTCACTCCTTACTTCTTCATTGGTGATGACTATGGATACTATGCAGGAGAGTCTTCAACATCAAGCAAAACACATACAGGGGTTATAGTTGGTGCAGTAGTTGCTGTTGTCGTCTTCTTGGTACTGTCCCTCCTTGCAGGAATATATGCAATCCACCAAAAGAAAAGAGCGAAAAGAGCCAAGGACTTTAATCCTTTTGCAAATTGGGAACAGAACAAGAATAGTGGCAATGCTCCTCAGTTGAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTAAAGAGATACAGCAACAACTTTTCTGAAACAAATATTATTGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCCTCTGGGGAACTGGTTGCTATCAAGCGAGCTGCACAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACCGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTTCGACAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCGAATGGCACTGTGATGGACAGTATTTCAGGAAAATCCGGAATTGTTATGGACTGGATGAGGAGGCTAAAAGTAGCAGTGGGTGCAGCTAGAGGGCTGGCATATCTTCATGAGCTTGCTAACCCACCAATTATACACAGGGACATAAAATCAAGCAATATCCTACTTGATGACCATCTAAACGCGAAAGTTGCCGATTTTGGTCTCTCCAAGCTTAAGGACAGTGACAAGGGCCATATCACTACTCAAGTCAAAGGCACAATGGGCTACTTGGATCCTGAGTACTACATGACTCAGCAGTTGACAGATAAGAGCGATGTATATAGCTTTGGAGTTACAATGCTAGAGCTGGTAACAGGAAGAAGGCCAATAGAGCAAGGGAAATTCATTGTAAGGGAGGTTCTAAGGGTAATGGATAAATCAAAAGAGTTATACAACCTTCATGCCATTCTAGACCCAACCGTAGCCAAAGAAAACAAACCTAAAGGTTTAGAGAAGTTTGTGGACCTAGCATTGAGATGTGTCAAAGAACATGCAGCTGAGAGGCCTACAATGGTTGAAGTGGTGAGAGAGATTGAGAATATAATGGAGCTTGCTGGTTTGAACCCCACTGCAGAATCAGCAACATCATCAGCAACTTATGACAATACTAGTGGTTACCATCCTTATGGTGATGATCCGTTCGCCTACACCGGGGTTTTTCCATCAGTCAAGGTGGAACCTCACTAA 2853 0.4178 MDQHNKAILLLLLLFQVLLVAAQNSNQDFTALSSLTEFWENIPPSWVGSDPCGSGWEGIRCTNSRVTSIMLSSTTLKGRLSGDIQLLTELVTLDLSYNQDLTGTIPDEIGNLTKLHTLILVGCDFFGPIPDSIGSLKQLTFLALNMNRFSGKIPRTLGNLANIDWLDIADNQLEGSIPVSDGEGTGLDMLLKAQHFHFGNNRLSGEVPAQLFSSNMKLKHLLFDSNRLNGGIPDTVGVVKALEVVRFDRNQMSGEVPSSITNITKLSELYLSNNKLSGSMPDLSPLSQLTYVDLSNNTFNSSSIPSWASSLPFLTTIKLENTGLQGEVPVSIFNQSNIETVVMSNNELNGTLDIGNAYSDHLELIDLKNNKLTTFAQSNANIQITILLNGNSMCLESGVSSESYCKDSESVVTYSTPTNSCTSFRCSSDLVSSPNCKCAHPYIGVLFSRALSFSNLGNTSYYKILEQSLMTTFQQQNLPVDSVSLSNPFRNSSTDYFQLDIKVFPSQNDRFNRTGVSSIAFVLANQIFEAPEFFTPYFFIGDDYGYYAGESSTSSKTHTGVIVGAVVAVVVFLVLSLLAGIYAIHQKKRAKRAKDFNPFANWEQNKNSGNAPQLKGARWFSFEELKRYSNNFSETNIIGSGGYGKVYQGVLPSGELVAIKRAAQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEYIPNGTVMDSISGKSGIVMDWMRRLKVAVGAARGLAYLHELANPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDSDKGHITTQVKGTMGYLDPEYYMTQQLTDKSDVYSFGVTMLELVTGRRPIEQGKFIVREVLRVMDKSKELYNLHAILDPTVAKENKPKGLEKFVDLALRCVKEHAAERPTMVEVVREIENIMELAGLNPTAESATSSATYDNTSGYHPYGDDPFAYTGVFPSVKVEPH 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1016 950 Gene3D Transferase(Phosphotransferase) domain 1 708 922 - -
Dere10g1016 950 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Dere10g1016 950 FunFam Leucine-rich repeat protein kinase family protein 599 707 - -
Dere10g1016 950 SUPERFAMILY L domain-like 32 299 - -
Dere10g1016 950 Pfam Protein kinase domain 633 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1016 950 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
Dere10g1016 950 Gene3D Ribonuclease Inhibitor 284 398 IPR032675 -
Dere10g1016 950 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Dere10g1016 950 ProSiteProfiles Leucine-rich repeat profile. 265 287 IPR001611 GO:0005515
Dere10g1016 950 PANTHER RECEPTOR-LIKE PROTEIN 55 33 903 - -
Dere10g1016 950 SUPERFAMILY Protein kinase-like (PK-like) 611 900 IPR011009 -
Dere10g1016 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Dere10g1016 950 Gene3D Phosphorylase Kinase; domain 1 602 707 - -
Dere10g1016 950 CDD STKc_IRAK 638 903 - -
Dere10g1016 950 ProSiteProfiles Protein kinase domain profile. 632 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1016 950 FunFam Leucine-rich repeat family protein 27 182 - -
Dere10g1016 950 SUPERFAMILY L domain-like 283 379 - -
Dere10g1016 950 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 708 917 - -
Dere10g1016 950 SMART serkin_6 632 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g1016 950 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1016 Dere-ChrDere10 19041177 19048788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1016 7 950 Receptor kinase-like Gene Family AT5G49760 53.312 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dere10g1016 Pkinase 1.9e-47 CL0016