Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1010 ATGGCTATCTGGACTGTTCTCAAGTGTGCCGCCCAGCTATGCATTCCAGACATAATCCACAACCATGGCCAACCCATCACTATTCCTGACTTGATCTCCAATCTTCAAGTTCATGCTTCGAAAACTACCTATGTAAAGAGGCTAGTGCGCTTACTGGTGCATAATGGCTTCTTATCTGAAACCAAAGTCTGCGAGGAAGAAGAAGAAAAGGAGGCATGCACTCTTACGCCTTCTTCTAAGTTGCTCATCAAAGGCAACGAACCATGTCTAACACCAATGGTGCTAGGATTCATTGACACTGGAATGGCTAGTGATTCTCAAATGATCAACATGGCACTTAGTGACTGCAAGTCAGTTTTCAAAGGCCTGGAATCCCTAGTTGATGTATGTGGCGGCACAGGCACCACATGCAGACTCCTCTCCGAGGCATATCCTAATCCGAAATGCATAGTGTTTGATCTTCCCCAAGTTGTGGAAAACTTGTCAGGATCCAAGAACTTGAGCTATGTTGGTGGCAGGATGTTCGAATCCGTCCCTTCTGCACATGGCGTTCTATTGAAGGCAAGTAAATTTCTTGAATTCCCTTCATATGCATGTTGGGTGTTACATAATTGGGACGATGATTCCATAAAGATACTAAACAAATGTAAGGAAGCCATATCAAGCAAAGGCGAAGGGAGAAAGGTAACCATCATAGACACAGTGATAAATGAGAAGAAAGAAGAGTGTGAAATGACTGAAGTAAAACTCTTATATGACATTTTGATGATGAGTGTCCATAACGGAAAGGAGAGAAATGAGAAAGAATGGGAGATCCTTCTTCTCGCGGCAGGTCCCTGGCTTCTCTTAGCGGAATTTAACCAATGCCACTCCCTTGAGGATAAACTCAGTACTTATACCAACACTCCACGTGCTTTGAGCCTTCAAGACCTCATCACCTGTACCAACACTCTAGGTGTTTCGAACCTTCAAGACCTCATCACAAACTATTAG 993 0.4371 MAIWTVLKCAAQLCIPDIIHNHGQPITIPDLISNLQVHASKTTYVKRLVRLLVHNGFLSETKVCEEEEEKEACTLTPSSKLLIKGNEPCLTPMVLGFIDTGMASDSQMINMALSDCKSVFKGLESLVDVCGGTGTTCRLLSEAYPNPKCIVFDLPQVVENLSGSKNLSYVGGRMFESVPSAHGVLLKASKFLEFPSYACWVLHNWDDDSIKILNKCKEAISSKGEGRKVTIIDTVINEKKEECEMTEVKLLYDILMMSVHNGKERNEKEWEILLLAAGPWLLLAEFNQCHSLEDKLSTYTNTPRALSLQDLITCTNTLGVSNLQDLITNY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1010 330 Pfam O-methyltransferase domain 100 278 IPR001077 GO:0008171
Dere10g1010 330 SUPERFAMILY "Winged helix" DNA-binding domain 4 86 IPR036390 -
Dere10g1010 330 Gene3D - 2 82 IPR036388 -
Dere10g1010 330 PIRSF O-mtase 95 281 IPR016461 GO:0008168
Dere10g1010 330 PIRSF O-mtase 1 100 IPR016461 GO:0008168
Dere10g1010 330 Gene3D Vaccinia Virus protein VP39 91 292 IPR029063 -
Dere10g1010 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 278 IPR029063 -
Dere10g1010 330 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 300 IPR016461 GO:0008168
Dere10g1010 330 Pfam Dimerisation domain 6 53 IPR012967 GO:0046983
Dere10g1010 330 PANTHER O-METHYLTRANSFERASE 3 278 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1010 Dere-ChrDere10 18974440 18976314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1010 98 278 Monolignol Biosynthesis Gene Families AT5G54160 34.239 3.75e-26 105