Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1007 ATGGTAAAGTGGATTGTTAATACATTATTGTCCCATGGAGAATACGTTGGTGAGTTCTTTGAAGCTCAAGCTCACTTGTACAAACACATTTTTGGGTTCCTGAACTGCATGGTTCTCAAGTGTGCCGTGCAGCTAAGCATTCCAGACATAATCCACAACCATGGGAAACCCATTACCATTCCTGACTTGGTCTCTGATCTTCAAGTTCACCCATCCAAATTTGCCTACGTAAAGAGACTTGTGCGCTTACTGGTGCACAATGGCTTCTTAGCAGAAACCAACGCCTACGACGAAGAGGAAGAAGAAGAAAAGGAGGCATACACTCTCACTTATTCTTCTAAATTCCTCGTCAAAGGCAAGGAACCTTGCCTAGCACCAATGGTGCTAGGGTTTGTTGACACTGGTTTTATTGGTTCATTTGATTGGTTGGGAAGGTGGTTCAAAGGGGAGGAGAAGACTATAGTTGAGAGTGCCTTTGGGGTACGGTGGTGGGATCTGCTTAGACGAGATCCTCACTATATGAAGTCTTTGAACGAAGGAATGGCTAGTGATTCCCAAATGATCAACATGGCACTTAGGGACTGCAAGTCAGTTTTCAAAGGCCTAGAATCCCTAGTTGACGTAGGTGGTGGCACAGGCACCACATGCAGGATCCTCTCTGAGGCATATCCTAATCTGAAATGCATAGTGTTTGATCTTCCACAAGTTGTAGAAAACCTGTCTGGAACGAAGAACTCGAGTTTTGTTGGCGGCAGCATGTTTGAATCCGTCCCTTACGCTCATGCCGTTCTATTGAAGGCAAGTAAATTTCTTGAGTTCCCATGTATATATGTATAG 837 0.4444 MVKWIVNTLLSHGEYVGEFFEAQAHLYKHIFGFLNCMVLKCAVQLSIPDIIHNHGKPITIPDLVSDLQVHPSKFAYVKRLVRLLVHNGFLAETNAYDEEEEEEKEAYTLTYSSKFLVKGKEPCLAPMVLGFVDTGFIGSFDWLGRWFKGEEKTIVESAFGVRWWDLLRRDPHYMKSLNEGMASDSQMINMALRDCKSVFKGLESLVDVGGGTGTTCRILSEAYPNLKCIVFDLPQVVENLSGTKNSSFVGGSMFESVPYAHAVLLKASKFLEFPCIYV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1007 278 Pfam Dimerisation domain 37 85 IPR012967 GO:0046983
Dere10g1007 278 SUPERFAMILY "Winged helix" DNA-binding domain 17 120 IPR036390 -
Dere10g1007 278 Gene3D - 11 116 IPR036388 -
Dere10g1007 278 Gene3D Vaccinia Virus protein VP39 117 268 IPR029063 -
Dere10g1007 278 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 278 IPR016461 GO:0008168
Dere10g1007 278 Pfam O-methyltransferase domain 143 266 IPR001077 GO:0008171
Dere10g1007 278 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 267 IPR029063 -
Dere10g1007 278 PANTHER O-METHYLTRANSFERASE 21 266 IPR016461 GO:0008168
Dere10g1007 278 FunFam Coniferyl alcohol 9-O-methyltransferase 11 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1007 Dere-ChrDere10 18925197 18927614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1007 37 266 Monolignol Biosynthesis Gene Families AT5G54160 30.380 1.46e-25 102