Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g1006 ATGGAAGACAAGCAAGACCAGAGAGGAGAAGACTTGTTTCAGGCTCAAGCTCACTTGTACAAGCACATGTTCAGTTTTGTAGATTCCATGTGCCTTAAAAGTGCCCTTCAATTGGGCATACCAGACATAATCTACAACCATGGCCAACCCATCACTCTATCTGAGTTGGTCTCAGCACTTAAGATTGACCCTTCAAGGTCTAATTATCTCCACAGGCTCATGCGCTTGCTGGTGCACTTTGGCCTTTTTGCTTCCACCAAAATCCCCAAAGAAGAAGATGAAGTTACATATGATCTCACACCATCCTCTAGGCTTCTCCTCAAAGGCAACATTCCCAGCTTGTTTGCTTATTCTCAAGCAGTGTTTCATCCTGCAGTAATGAACCCATGTAAGTTCTTGGGAGACTGGCTTCATAGTAACGGAGATAGTACAGCTTTTGAAACTGCCTTTAGCATGGAGTTCTGGAGGTATGGAAGCAAGAACGCTGAGTTTAGTGCAGTGTTCAATGAGGGTATGGTTAGTGACTCTGGAATGATGAAGCTGGTAATGAAAGACAGTGAATCAGTGTTTCTGGGTTTGAACTCTTTGGTTGATGTTGGGGGTGGAAAGGGAGCTACAGCAATGATCATTTCTGAGGCATTTCCAGATTTGAAGTGCACAGTGATGGATCTTCCTCATGTTGTTGCAGATATGACAGATAGTGGCAGTGTGAAGTTTGTAGGAGGTGATATGTTTCAGTGTATTCCTTCAGCGGATGCCATTCTTCTCAAGATGGTTTTGCACACTTTGACTGATGAAGACTGTGAGAGGATACTAAAGAAGTGCAGGGAAGCTACTTCAAGCAGAGGCAAGCAAGGAAAAGTGATTATCATAGACATGATGATAAATGAAGAAAAGGACAATCATGAAATGACAGAAGTGAAGCTGTATTTCGATGTGCTGATGATGTCTTTGGTCAACGGAAAAGAGAGAGACGAACAAGAATGGGAGAAACTGTTCTTAAAGGCTGGATTTAGTCACTACAAGATAACACCTATTTTAGGTGTAAGACTCGTACAAAATCTTCCAAGAAACCTACTGCACATCAGGGAATCAAGTCATGAAGCAAGTGAGCTATTTCAAGCTCAAACTCATTTATACAAACACACATACAATTTCATAACTTCCATGTTCCTGCACCTGCTAGTGCACAATGGAATTTTTGCCACAACAAAAGTTCAATACAACAGACAAGAGGAAGAAGAAGATGAAGCCTATGTTCTAAGTCCTTCATCCAAACTTCTCCTCAAAGGCAAGGAGCCTTGTTTGTCCTCATTAGTTCTGGAATCACTTATGCCACATCGGCTGAATATGCGGCATTCTTCTAAGAACTGGTTTTATGGGGACAAGGAGATGATTCTGTTTGAGAGTGCTTCAGGGATGAGTTATTGGGATTATATTAGCCAGAATCCCAAACTGATGAATTCATTTGATGAAGTGGAGGTGGCTGATTCCCAAATGCTGAAGTTGGCTCTCAGAGATTGCAAACAAGTTATTGGGTGTTTGGGTTCCTTAGTTAACGTAGGAGGCGGGACTGGAACTGTAGCAAAGCTTATCTGTGACTGTGAAGCATTTCCTGAGTTGAAATGCATAGTGTTTGATCTACCACATGTTGTGGCTAACTTGCCACAAAGTCAAAATTTGAGTTATGTTGGGGGAGATATGTTTAAATCCATTCCTTCTACTGATGTAGTTCTATTGAAGTGGATTCTACATAATTGGTTTAGATGA 1770 0.4158 MEDKQDQRGEDLFQAQAHLYKHMFSFVDSMCLKSALQLGIPDIIYNHGQPITLSELVSALKIDPSRSNYLHRLMRLLVHFGLFASTKIPKEEDEVTYDLTPSSRLLLKGNIPSLFAYSQAVFHPAVMNPCKFLGDWLHSNGDSTAFETAFSMEFWRYGSKNAEFSAVFNEGMVSDSGMMKLVMKDSESVFLGLNSLVDVGGGKGATAMIISEAFPDLKCTVMDLPHVVADMTDSGSVKFVGGDMFQCIPSADAILLKMVLHTLTDEDCERILKKCREATSSRGKQGKVIIIDMMINEEKDNHEMTEVKLYFDVLMMSLVNGKERDEQEWEKLFLKAGFSHYKITPILGVRLVQNLPRNLLHIRESSHEASELFQAQTHLYKHTYNFITSMFLHLLVHNGIFATTKVQYNRQEEEEDEAYVLSPSSKLLLKGKEPCLSSLVLESLMPHRLNMRHSSKNWFYGDKEMILFESASGMSYWDYISQNPKLMNSFDEVEVADSQMLKLALRDCKQVIGCLGSLVNVGGGTGTVAKLICDCEAFPELKCIVFDLPHVVANLPQSQNLSYVGGDMFKSIPSTDVVLLKWILHNWFR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g1006 589 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Dere10g1006 589 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 349 589 IPR016461 GO:0008168
Dere10g1006 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 434 587 IPR029063 -
Dere10g1006 589 Pfam O-methyltransferase domain 133 339 IPR001077 GO:0008171
Dere10g1006 589 Pfam O-methyltransferase domain 457 587 IPR001077 GO:0008171
Dere10g1006 589 Gene3D - 2 106 IPR036388 -
Dere10g1006 589 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Dere10g1006 589 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Dere10g1006 589 Gene3D Vaccinia Virus protein VP39 430 588 IPR029063 -
Dere10g1006 589 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Dere10g1006 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 348 IPR029063 -
Dere10g1006 589 PANTHER O-METHYLTRANSFERASE 13 342 IPR016461 GO:0008168
Dere10g1006 589 SUPERFAMILY "Winged helix" DNA-binding domain 9 109 IPR036390 -
Dere10g1006 589 FunFam O-methyltransferase ZRP4 109 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g1006 Dere-ChrDere10 18904717 18912088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g1006 466 587 Monolignol Biosynthesis Gene Families AT5G54160 37.705 4.56e-20 90.5