Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0997 ATGACATGGTGCAATGACTCAGACGAAGACGAGAGGGGGATTCAGATAGTCACGCCCTCCATTACTCCTCCTAGACTTAATAACAACGCTTCTTCTGCTATAACTCACACCTCAAAACCCTCGGAAATTCGAACCATAACTTGCCCTTCATGTGGCCATAACATTCAGCTCCAAGAGCAGGCTGGAATTCATGACTTGCCGGGTTTACCAGCTGGGGTGAAGTTTGATCCAAATGACCAAGAAATATTGGAACATTTAGAGGCAAAGGTGCTGTCTGATGTGCGAAAGCTTCATCCTCTTATAGATGAGTTCATACCGACTCTTGAGGGCGAGAATGGGATCTGTTATACTCACCCAGAAAAGCTACCAGGCGTAAGCAAAGATGGGCAGATCCGCCACTTCTTTCACAGGCCTTCTAAAGCATACACAACAGGAACACGAAAGAGAAGAAAGGTTCACACAGACGAAGAGGGAAGCGAGACAAGGTGGCACAAGACAGGCAAAACCAGACCAGTTCTTGTTAATGGTGCAGTCAAAGGCTTCAAAAAGATACTTGTGCTCTACACCAACTATGGCAGGCAAAGGAAGCCAGAGAAGACCAATTGGGTGATGCACCAGTATCATCTTGGCAGTAACGAAGAAGAGAAGGACGGAGAGCTAGTGGTTTCAAAGGTGTTCTTCCAGACACAACCTAGACAGTGTGGTTCAATTCTTAAGGACCCATATGAAAAAAGATTGAACAATATTGATGACAGTACTACTGTATCAGTGCCTAAAGAAGCAGCTCTTATGGACTATTACAATTCTCCTTACATAAGTTATGACCATTTGGGTCATAATAATAGAGAAAGCTCTCCTCAACTTATTCCAAACTTGGTTGTCCAAGGTGATCATGGCTCTTCTTTTATCCGCTTAGCAATGGACGCAAACAAAGCAAGACTCGACAGAAAATAG 954 0.4413 MTWCNDSDEDERGIQIVTPSITPPRLNNNASSAITHTSKPSEIRTITCPSCGHNIQLQEQAGIHDLPGLPAGVKFDPNDQEILEHLEAKVLSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVLVNGAVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFFQTQPRQCGSILKDPYEKRLNNIDDSTTVSVPKEAALMDYYNSPYISYDHLGHNNRESSPQLIPNLVVQGDHGSSFIRLAMDANKARLDRK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0997 317 Pfam No apical meristem (NAM) protein 70 209 IPR003441 GO:0003677|GO:0006355
Dere10g0997 317 ProSiteProfiles NAC domain profile. 69 228 IPR003441 GO:0003677|GO:0006355
Dere10g0997 317 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 33 257 IPR044799 GO:0003700
Dere10g0997 317 Gene3D NAC domain 78 232 IPR036093 GO:0003677|GO:0006355
Dere10g0997 317 FunFam NAC domain-containing protein 73 78 232 - -
Dere10g0997 317 SUPERFAMILY NAC domain 63 228 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0997 Dere-ChrDere10 18714245 18717988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0997 1 313 NAC Transcription Factor Family AT1G28470 59.939 9.06e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere10g0997 NAM 7e-22 No_clan