Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0996 ATGAGCCATATTGCTGAACGTGCTACTTATCATTTGGCCATAATTTGTCTATCTGTGTCTCTCTTCGTTCTGGGTATTGTCCTCTTCTTTGCCTGCAGGAAGAAGCCAGTTCAGTCTGAAGAGACTCTTCCTGTGAAGCTCTGTGCTCGAGCATACCCATTAATGGACATTGAAGCTGCCACTGATGGCTTCAATCATCAGAGAATCATGGCCAAAGATCACCTGGGAACTCTGTATGCTGGTGTGTTGGAAAAAGGTGAACTTGTAGCAGTCAAACGGATTCATCCTCTTCTGGTTCTCAGCAATGCAGGGTTGAATGGGTTCTCTTCGGCTCTGAAATGCCTGTCTCTAGCTCTACACCCCAACGTCGTTCCCATTCTGGGATTCTCAGAAGCACCAGGAGAGAGAATCATAGTGATGGAGTTTGTGGGCATGGTGAGCTTAGACTTCTATCTGCATCAAAACCCAGAAGGCAACAATTCACTTCTAGATTGGAACCATCGTTTCAGAATTGCAGCCGGAGCAGCCAGAGGGCTTCAGTACCTGCACGAAGTGGTATCACCAAGCATCATCCATGGCTGTGTCAAGTCCTCAAACATCCTCATTGATGTGAGCTTCTGTGCAAGGATCTCTGACTATGCCCTCAACTTTCTTGCACCCCAAGAAAAGAGAGGCCTTGTGGGGCATGTGGACGATGAGTATTGGACCCATGATAGTGGAAGAGGAGGTGGTGCCTGCAAGGAGAGTGATGTTTATGGGTTAGGGGTGGTCTTGTTGGAGCTTCTGAGTGGAAGAGGGTGTGAGGGAGGGTTGCTAGCAAAGTGGGCTCTGCCTCTGATTAAGGAGATGAGGTACAGTGAAGTCTTGGACCCCAGATTGGTGATTCCTTCTGAGATGAAGCCTCTGGCTAGATTGGCCAAAGTTGCTTCAGCTTGTGTTTGCAACTCAAGGAAGTGTAGGCCTTCCATTGCTCAAGTGGCTACCATTTTGAACCATTTAGAAAGGGAAGTATGTCTTTGA 1020 0.4784 MSHIAERATYHLAIICLSVSLFVLGIVLFFACRKKPVQSEETLPVKLCARAYPLMDIEAATDGFNHQRIMAKDHLGTLYAGVLEKGELVAVKRIHPLLVLSNAGLNGFSSALKCLSLALHPNVVPILGFSEAPGERIIVMEFVGMVSLDFYLHQNPEGNNSLLDWNHRFRIAAGAARGLQYLHEVVSPSIIHGCVKSSNILIDVSFCARISDYALNFLAPQEKRGLVGHVDDEYWTHDSGRGGGACKESDVYGLGVVLLELLSGRGCEGGLLAKWALPLIKEMRYSEVLDPRLVIPSEMKPLARLAKVASACVCNSRKCRPSIAQVATILNHLEREVCL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0996 339 FunFam serine/threonine-protein kinase-like protein ACR4 31 142 - -
Dere10g0996 339 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Dere10g0996 339 SUPERFAMILY Protein kinase-like (PK-like) 42 330 IPR011009 -
Dere10g0996 339 PANTHER OS01G0253100 PROTEIN 49 334 - -
Dere10g0996 339 PIRSF ILK 33 338 - -
Dere10g0996 339 Gene3D Transferase(Phosphotransferase) domain 1 146 337 - -
Dere10g0996 339 FunFam Receptor protein kinase CRINKLY4 143 337 - -
Dere10g0996 339 ProSiteProfiles Protein kinase domain profile. 64 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0996 339 Gene3D Phosphorylase Kinase; domain 1 29 142 - -
Dere10g0996 339 Pfam Protein tyrosine and serine/threonine kinase 70 328 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0996 Dere-ChrDere10 18660590 18662618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0996 49 330 Receptor kinase-like Gene Family AT3G59420 38.983 1.87e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere10g0996 PK_Tyr_Ser-Thr 4.4e-21 CL0016